Schizosaccharomyces pombe (fission yeast): 2540052
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Entry
2540052 CDS
T00076
Symbol
rar1, SPOM_SPBC17A3.04C
Name
(RefSeq) methionine--tRNA (Met) ligase Rar1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo00450
Selenocompound metabolism
spo00970
Aminoacyl-tRNA biosynthesis
spo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
2540052 (rar1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
2540052 (rar1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spo01007
]
2540052 (rar1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spo03016
]
2540052 (rar1)
Enzymes [BR:
spo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
2540052 (rar1)
Amino acid related enzymes [BR:
spo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
2540052 (rar1)
Transfer RNA biogenesis [BR:
spo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
2540052 (rar1)
Prokaryotic type
Other AARSs
2540052 (rar1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
Anticodon_1
NRDD
Motif
Other DBs
NCBI-GeneID:
2540052
NCBI-ProteinID:
NP_595586
PomBase:
SPBC17A3.04c
SPBC17A3.04c.1
UniProt:
Q9UUF2
LinkDB
All DBs
Position
II:complement(join(1407408..1409559,1409621..1409699,1409766..1409883))
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AA seq
782 aa
AA seq
DB search
MATYKVQIPASFKTSYSFAESLKVSIAISAFSVKVPCEGAANCNSVRLVNSKEPEKYVSD
ANAIVSFLYWKQEEDLFNSFISSKLSILDWEALQFTPKAYTAKTKEDFAYLLSQLETIFK
ENEILNEFTPVEVALASDIYFCVLNGAPVREYPLLSAWYLKIEKQKPFVQALKLTFEKTL
GQPAVTSTEKIPVSETTRNVNSQHLMRERVPGEKILPKSNERNILITSALPYVNNVPHLG
NIVGSTLSADVFARYHRARNHNTLYICGTDEYGTATETKALEEGVSPKELCDKYHALHKE
VYDWFEIDFDHFGRTTTPKQTGIAQHIFTKLYNNDYMAIDTMTQLYCEVHQGYLADRYVE
GTCPKCGYDDARGDQCDGCGGLLNAFELIDPKCKLDRATPVKRETKHVFLSLDKLQPAVE
SWAMQSAVEGKWSNNGRSITESWLKEGLRPRCITRDLKWGTPVPLEEFKGKVLYVWFDAT
IGYISITANYTDEWEKWWRNPEQVKLYQFMGKDNVPFHTVIFPSSLLGTGEKWTMLHHIN
TTDYLNYETGKFSKSRGVGVFGNTAQDIGLSPSVWRYYLLSSRPETSDTMFTWKEFITRH
NSELLANLGNFVNRTLKFTTAKYNGLVPHYLTDPSVGAGKLKADFVKDVNALLAKYNAAL
EASKLREGLRLAMEISARGNQYLQDNRIDNKCYLYERQKCADAIGYALNLIYLLAAIFYP
YMPSTSTSIYKQLNAPAAAIPDTWELCLLPGHRIGEPEYLFTRIDESMEEEWRSKYGGNG
SN
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctataaagttcaaatcccagcgtctttcaagacgtcttatagttttgctgag
tcattaaaagtttctattgccatttctgctttctctgtcaaggtaccttgtgagggagct
gcaaactgcaattctgtacgtttagtaaattcaaaggaacctgaaaaatatgtttcggat
gcaaatgcgatagtcagttttttgtattggaaacaggaagaagatttgttcaattccttt
atttcttctaaacttagtattttggattgggaagcccttcagtttacccctaaggcgtat
actgcaaagacaaaggaagactttgcttatttgctttctcagttagaaacaattttcaaa
gaaaatgaaatattgaatgaatttactcctgtagaagtagcgcttgcttccgatatctat
ttttgtgttctgaatggtgctcccgtccgtgaatatccactccttagcgcttggtatctt
aaaatcgaaaagcaaaaaccctttgttcaggccttaaagttgacttttgaaaaaacattg
gggcaacctgccgtaacatcaacggaaaaaattcctgtgtctgaaactactcgcaatgtc
aattcccaacacttaatgcgtgagcgagttcctggtgagaagattcttcccaagtctaat
gaaaggaatattttgattacttctgccttaccatatgtcaacaacgtacctcatttggga
aacattgttggtagtactcttagcgccgacgtttttgcccgttatcatcgcgctcgtaac
cacaatactctttatatttgcggtactgatgagtatggtacagccactgaaaccaaagcg
ttagaggaaggcgtgtctcctaaagagctttgtgataagtatcacgcattacataaggag
gtttacgactggtttgagattgactttgatcactttggtcgtactactactcccaaacaa
actggaattgctcaacatattttcacaaagctgtacaacaatgattacatggctatagat
accatgactcagctgtactgcgaggtccatcaaggataccttgccgacagatatgtcgag
ggaacttgtcccaaatgtggctatgatgatgccagaggtgatcaatgtgatggttgcggt
ggacttttgaacgcttttgagcttattgatcctaagtgcaaactggatcgtgcaacaccc
gttaaacgtgagactaagcacgttttcttatcgttggataaacttcaacctgccgttgag
tcatgggctatgcagtcggctgttgaagggaaatggtccaacaacggtcgctccatcact
gagtcatggttaaaggaaggattgcgtccacgttgtattactagagatctgaaatggggt
actcctgttcctttggaggaatttaaaggaaaggtattgtatgtttggtttgatgcaaca
attggatatattagtattaccgccaattatacagacgaatgggagaagtggtggagaaac
cctgagcaagtcaaactttatcagtttatgggtaaagataatgttccattccatactgtt
attttcccttcctctcttttgggtactggcgagaaatggaccatgttgcatcatatcaat
actactgattatttgaattatgagactggtaaattttcgaagtcaagaggggttggtgtg
ttcggtaataccgctcaagacattggtctttctccttctgtttggcgctattatcttttg
tcatctcgccctgaaacctcggatacaatgtttacatggaaggaatttattactaggcat
aactccgagcttttagctaatctcggtaactttgtgaatcgtacacttaaattcactacc
gccaaatacaatggtctcgtccctcattatctaactgatccttccgttggtgctggcaag
ctcaaggccgatttcgttaaagacgttaacgctcttttagccaagtacaatgccgcactt
gaggcctctaagttacgtgaaggcttacgtcttgccatggaaatatcagctcgtggtaac
caatacttacaagacaatcgtatcgacaacaagtgctatctctatgagcgccaaaagtgt
gctgatgcaattggttatgccttgaacttgatttatcttcttgctgccattttctatcct
tatatgcctagtaccagtaccagcatttacaagcaactgaatgctcctgcagctgctatt
cccgatacttgggagctttgcttacttcctggacatagaattggcgagcctgagtactta
tttacccgcattgatgagtccatggaagaagaatggcgcagcaaatatggtggtaatgga
tcaaactaa
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