KEGG   Schizosaccharomyces pombe (fission yeast): 2540198
Entry
2540198           CDS       T00076                                 
Symbol
cyp3, SPOM_SPBC1709.04C
Name
(RefSeq) cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp3
  KO
K09567  peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    2540198 (cyp3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spo03041]
    2540198 (cyp3)
   03110 Chaperones and folding catalysts [BR:spo03110]
    2540198 (cyp3)
Enzymes [BR:spo01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     2540198 (cyp3)
Spliceosome [BR:spo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    2540198 (cyp3)
Chaperones and folding catalysts [BR:spo03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    2540198 (cyp3)
SSDB
Motif
Pfam: Pro_isomerase
Other DBs
NCBI-GeneID: 2540198
NCBI-ProteinID: NP_595437
PomBase: SPBC1709.04c SPBC1709.04c.1
UniProt: O74729
LinkDB
Position
II:complement(join(1103770..1104063,1104141..1104208,1104260..1104306,1104359..1104376,1104461..1104525,1104578..1104607))
AA seq 173 aa
MSTEPVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTF
HRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQF
FITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM
NT seq 522 nt   +upstreamnt  +downstreamnt
atgagcaccgaacctgttgtttttatggatattgctattgatgggagattattaggaagg
atcaagatccggttgttttccagtatagtcccgaagactgctgaaaacttcagacaattt
tgtacaggagaaacgcttggagttaatcaaaaaccgatcggttacaaaaatagtactttt
cataggattattcaaggttttatgatacaaggaggtgattttgtgagtggagatggtact
ggcagcgcgaccattttcaattcacgtacatttcctgacgaaaattttactctcaaacat
gatcgccctggtttactgagtatggctaatgctgggaaagactcaaatggatgccaattc
tttattactaccgttccttgcgattttttggacggcaaacatgtcgtctttggcgaagta
attgagggctacgacattgttaaagaaattgaatctactcctgttggagcaaattcacga
cccaagtcaaacgttgcgatagtcgaatgtggagaaatgtag

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