Schizosaccharomyces pombe (fission yeast): 2540247
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Entry
2540247 CDS
T00076
Symbol
cdh1, SPOM_SPBC336.02
Name
(RefSeq) SSU rRNA dimethylase
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2540247 (cdh1)
Enzymes [BR:
spo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
2540247 (cdh1)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
2540247 (cdh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
PCMT
Methyltransf_12
CMAS
MTS
Methyltransf_23
TRM5-TYW2_MTfase
Methyltransf_31
AAA_lid_4
DREV
Methyltransf_2
Ubie_methyltran
Methyltransf_28
PrmA
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
2540247
NCBI-ProteinID:
NP_596122
UniProt:
Q9USU2
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Position
II:join(2736963..2737097,2737156..2737944)
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AA seq
307 aa
AA seq
DB search
MGKIRVRNNNAASDAEVRNTVFKFNKDFGQHILKNPLVAQGIVDKADLKQSDTVLEVGPG
TGNLTVRMLEKARKVIAVEMDPRMAAEITKRVQGTPKEKKLQVVLGDVIKTDLPYFDVCV
SNTPYQISSPLVFKLLQQRPAPRAAILMFQREFALRLVARPGDPLYCRLSANVQMWAHVK
HIMKVGKNNFRPPPLVESSVVRIEPKNPPPPLAFEEWDGLLRIVFLRKNKTIGACFKTSS
IIEMVENNYRTWCSQNERMVEEDFDVKSLIDGVLQQCNLQDARASKCGQTEFLSLLHAFH
QVGVHFA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagattcgggttaggaataacaatgcagcttctgatgcagaagtgaggaataca
gttttcaaattcaacaaagattttggccagcatatccttaaaaacccactggttgctcag
ggaattgtggataaggctgatttgaagcaatccgatactgttttggaagtaggaccaggt
actggtaacttgacagtaaggatgcttgagaaggcgcgtaaagtaattgctgttgaaatg
gacccccgaatggctgcagaaatcaccaagcgtgtgcaagggacaccaaaggaaaagaaa
ttgcaggtggtacttggtgatgtgattaagaccgaccttccttactttgatgtatgcgtg
tctaatacgccttatcaaatttcctcaccattggtatttaaattattacagcagagaccg
gctcctcgtgcggcaattcttatgttccagagagaatttgctttacgcttggttgcaagg
cctggtgaccctttgtactgtcgattatccgccaatgtgcaaatgtgggctcacgtcaag
catatcatgaaagttggaaagaataactttcgaccaccacctttggttgaatcaagtgtt
gttcggatagaaccaaaaaatccaccccctccattggcttttgaggaatgggatggtctg
ttacggattgtgtttttaaggaaaaataaaaccattggtgcttgctttaaaacctcttca
attatcgaaatggtcgaaaataactatcgcacgtggtgttcgcaaaacgaacgcatggtt
gaggaagactttgatgtaaaatctttgattgacggagttttacaacaatgcaatcttcaa
gatgcccgagcttctaagtgtggacaaacagagtttttgtctctgttgcacgccttccat
caggttggcgttcattttgcttaa
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