Schizosaccharomyces pombe (fission yeast): 2540255
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Entry
2540255 CDS
T00076
Symbol
cdc6, SPOM_SPBC336.04
Name
(RefSeq) DNA polymerase delta catalytic subunit Cdc6
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03030
DNA replication
spo03410
Base excision repair
spo03420
Nucleotide excision repair
spo03430
Mismatch repair
spo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
2540255 (cdc6)
03410 Base excision repair
2540255 (cdc6)
03420 Nucleotide excision repair
2540255 (cdc6)
03430 Mismatch repair
2540255 (cdc6)
03440 Homologous recombination
2540255 (cdc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
2540255 (cdc6)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2540255 (cdc6)
Enzymes [BR:
spo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
2540255 (cdc6)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
2540255 (cdc6)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
2540255 (cdc6)
MMR (mismatch excision repair)
DNA polymerase delta complex
2540255 (cdc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
2540255
NCBI-ProteinID:
NP_596124
UniProt:
P30316
LinkDB
All DBs
Position
II:join(2743843..2744071,2744124..2747155)
Genome browser
AA seq
1086 aa
AA seq
DB search
MTDRSSNEGVVLNKENYPFPRRNGSIHGEITDVKRRRLSERNGYGDKKGSSSKEKTSSFE
DELAEYASQLDQDEIKSSKDQQWQRPALPAINPEKDDIYFQQIDSEEFTEGSVPSIRLFG
VTDNGNSILVHVVGFLPYFYVKAPVGFRPEMLERFTQDLDATCNGGVIDHCIIEMKENLY
GFQGNEKSPFIKIFTTNPRILSRARNVFERGEFNFEELFPVGVGVTTFESNTQYLLRFMI
DCDVVGMNWIHLPASKYQFRYQNRVSNCQIEAWINYKDLISLPAEGQWSKMAPLRIMSFD
IECAGRKGVFPDPSIDPVIQIASIVTQYGDSTPFVRNVFCVDTCSQIVGTQVYEFQNQAE
MLSSWSKFVRDVDPDVLIGYNICNFDIPYLLDRAKSLRIHNFPLLGRIHNFFSVAKETTF
SSKAYGTRESKTTSIPGRLQLDMLQVMQRDFKLRSYSLNAVCSQFLGEQKEDVHYSIITD
LQNGTADSRRRLAIYCLKDAYLPQRLMDKLMCFVNYTEMARVTGVPFNFLLARGQQIKVI
SQLFRKALQHDLVVPNIRVNGTDEQYEGATVIEPIKGYYDTPIATLDFSSLYPSIMQAHN
LCYTTLLDSNTAELLKLKQDVDYSVTPNGDYFVKPHVRKGLLPIILADLLNARKKAKADL
KKETDPFKKAVLDGRQLALKVSANSVYGFTGATNGRLPCLAISSSVTSYGRQMIEKTKDV
VEKRYRIENGYSHDAVVIYGDTDSVMVKFGVKTLPEAMKLGEEAANYVSDQFPNPIKLEF
EKVYFPYLLISKKRYAGLFWTRTDTYDKMDSKGIETVRRDNCPLVSYVIDTALRKMLIDQ
DVEGAQLFTKKVISDLLQNKIDMSQLVITKALSKTDYAAKMAHVELAERMRKRDAGSAPA
IGDRVAYVIIKGAQGDQFYMRSEDPIYVLENNIPIDAKYYLENQLSKPLLRIFEPILGEK
ASSLLHGDHTRTISMAAPSVGGIMKFAVKVETCLGCKAPIKKGKTALCENCLNRSAELYQ
RQVAQVNDLEVRFARLWTQCQRCQGSMHQDVICTSRDCPIFYMRIAEHKKLQQSVDLLKR
FDEMSW
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgacagataggtcttcaaatgagggcgtcgtgttaaataaagaaaactatccatttccc
cgaagaaatggttcaattcatggcgaaattacagatgtcaaacggcgacgtttaagcgaa
agaaatggatatggtgataaaaagggctcatcctcaaaagaaaaaacttcatcttttgag
gatgagctggctgaatacgcttcacaattggaccaagatgaaataaaatcttcaaaagat
cagcagtggcaacgaccagctttacctgcaataaatcctgagaaggatgatatttatttt
cagcaaatcgatagtgaggagttcacagaaggatctgtaccttcaattcgtttgtttggt
gttactgacaatggaaacagcatccttgttcatgttgtgggattccttccgtacttttat
gttaaagccccggttggatttcgacctgagatgctagaacgtttcacacaagatttagat
gctacttgtaatgggggtgtgatcgatcattgcattatagagatgaaggaaaatttatat
ggatttcagggaaatgaaaaatctccattcattaaaatctttactactaaccctcgtata
ttatctcgagcacgaaatgtatttgaaagaggagaattcaacttcgaagagcttttccct
gttggtgtcggtgtcactacttttgagagcaatacgcaatatcttcttagattcatgatt
gactgtgatgttgttggtatgaattggattcatcttcctgcttcaaaatatcaatttcgt
taccagaatcgagtttctaattgtcaaattgaagcttggattaattacaaagacttgatc
agtcttccagctgaaggccagtggtctaaaatggccccactgaggatcatgagctttgat
attgaatgcgcaggtcgcaaaggcgtttttcctgatccctctattgaccctgtaattcaa
attgcaagtatagtaacgcagtatggagactccactccttttgttcgtaatgtcttttgt
gttgatacatgctcacaaatcgttggaacacaagtatatgaatttcaaaatcaggctgaa
atgctttcaagttggtcaaaatttgttcgtgatgttgacccagatgttttaattgggtac
aacatctgcaactttgatatcccttacctcttggatcgagcaaaaagcttacgcattcac
aatttcccattacttggccgtattcataattttttttctgtcgcaaaggaaaccacgttt
tcaagtaaagcatatggtactcgtgaaagcaaaaccactagtattcctgggcgtttgcag
cttgatatgttacaagtaatgcagcgtgattttaagcttcgatcttactctttaaatgca
gtctgctctcagtttctaggcgagcaaaaagaagatgtacactattctatcatcactgac
ttgcaaaatggcactgccgattctagaagacgtttagctatttattgtctgaaagatgca
tatttaccccaacgcttaatggacaaattaatgtgttttgttaactatactgaaatggca
agagtaacaggtgtaccgtttaattttcttcttgctagaggccaacagattaaagttatt
tctcaattgtttcgcaaagctcttcaacatgacctagttgttccaaatatacgtgtaaat
ggaacagatgagcaatatgaaggtgctacagtcattgaaccgattaaaggatactatgat
acccctattgcaacactggattttagttcactttatccttcgattatgcaagcccataat
ttatgctatacgacattacttgactcaaatactgcagaattattaaaacttaagcaagat
gttgactactcagtgactccgaacggagattatttcgttaaaccacatgttcgtaaagga
ctactccctattatcttagctgatttacttaatgcacgtaagaaagcaaaagcagatcta
aaaaaggaaacggacccattcaaaaaggctgttttggatggtagacagctagctttaaaa
gtaagtgctaattcagtatatggatttactggtgctaccaacggacgtttgccgtgttta
gcaatttcttcttctgttacctcttatggtcgacaaatgattgaaaaaaccaaggatgtt
gtagaaaagagatacagaattgagaatggatactctcacgatgcagttgtaatctatggt
gacactgattctgttatggttaagtttggcgttaaaacgttacctgaagccatgaaatta
ggagaggaagcagctaattatgtttcagaccagtttccgaatcctattaaactggagttt
gagaaagtgtactttccatatcttttaatttccaaaaaacgttatgcaggattattttgg
actcgtacagatacttatgataaaatggactctaaaggaatagaaactgtcagaagagat
aactgtcctctagtatcttatgtgattgacacagctttgagaaaaatgttaattgatcag
gatgtagagggtgcacagttgtttacaaaaaaagttatttccgatttgttacaaaacaaa
attgatatgtcacaacttgtaatcacaaaggcattatcaaaaactgattatgctgccaaa
atggcacacgttgaattggctgagcgaatgcgtaaacgagatgctggctccgccccagcc
ataggagatcgcgttgcatacgttattattaaaggtgcacaaggtgatcaattttatatg
aggtcggaggaccctatatatgtattggaaaataacattcctattgatgcaaaatattat
ttggaaaatcaactctccaaacctttgcttagaatttttgagcctattcttggtgaaaaa
gctagctctttacttcatggtgaccatactcggacgatttccatggcagcccccagtgtt
ggaggaataatgaaattcgcagtaaaggttgagacctgtcttggatgcaaagctcccata
aaaaaaggtaaaactgctttatgtgagaattgtctaaatagatcggcggaactgtatcaa
cgtcaggttgctcaagtgaatgatttagaagttcgttttgctcgcttatggactcaatgt
cagcgatgccaaggaagtatgcatcaagacgtcatttgtaccagtagagactgccccata
ttttatatgcgaattgcagaacacaagaaacttcagcaatctgttgacttactgaaaaga
tttgatgaaatgtcctggtga
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