Schizosaccharomyces pombe (fission yeast): 2540348
Help
Entry
2540348 CDS
T00076
Symbol
exo1, SPOM_SPBC29A10.05
Name
(RefSeq) exonuclease I Exo1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
2540348 (exo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
2540348 (exo1)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2540348 (exo1)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
2540348 (exo1)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
2540348 (exo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
2540348
NCBI-ProteinID:
NP_596050
PomBase:
SPBC29A10.05
SPBC29A10.05.1
UniProt:
P53695
LinkDB
All DBs
Position
II:2545549..2547264
Genome browser
AA seq
571 aa
AA seq
DB search
MGIKGLLGLLKPMQKSSHVEEFSGKTLGVDGYVWLHKAVFTCAHELAFNKETDKYLKYAI
HQALMLQYYGVKPLIVFDGGPLPCKASTEQKRKERRQEAFELGKKLWDEGKKSQAIMQFS
RCVDVTPEMAWKLIIALREHGIESIVAPYEADAQLVYLEKENIIDGIITEDSDMLVFGAQ
TVLFKMDGFGNCITIRRNDIANAQDLNLRLPIEKLRHMAIFSGCDYTDGVAGMGLKTALR
YLQKYPEPRAAIRAMRLDKSLKVPVSFEKEFALADLAFRHQRVYCPKDKTLVHLSPPERE
LSVHEDAFIGSFFDNQLAIDIAEGRSNPITKCAFDIKDSSMQSFTKTTITISKRKGISKT
DISNFFMKSIPPSKRPTKSTSLIDVTNVKVQRTHLANDISSEKQSIKSANEKAYVTPKSN
SLKPGFGKSLSDISNSATKNENVPFLPPRTGVSKYFKLQKNTEKEIDEQVPSQSNNTTPT
SAKSDSASPQNWFSSFSYQTPNSASPPFSSLSHTLPISALAKIGHDALNRKNHASLPSRR
IVYKPPSSPSTPISMNPRPKGILSLQQYKFR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgggaattaaaggtcttttgggacttttgaagcctatgcagaaaagctctcatgtcgag
gagttttctggcaagactttgggagttgatggatatgtttggttgcacaaggcagtgttt
acatgtgctcatgaattagcatttaacaaggaaaccgataaatacctaaagtatgctatt
catcaggcgttaatgctacaatattatggtgtaaaacctttaatagtattcgatggagga
cctcttccctgtaaagcatcaactgagcaaaaaagaaaagaacgtcgccaagaggcattt
gaacttggtaagaaattgtgggatgaaggtaagaaaagtcaagcaataatgcaattctca
cgctgtgttgatgtgaccccagaaatggcttggaagttaataatcgctttgagagaacat
gggattgaatcaatcgttgctccgtatgaagcagatgctcaactcgtatatttggagaag
gaaaatatcattgatggcattattacggaagactctgatatgctagtttttggcgctcaa
acggtactatttaagatggatggatttgggaattgcataactattagacgtaatgacata
gcaaacgcacaagacttgaatctccgtcttccgattgaaaaacttcgacatatggcaata
ttttccggatgtgattacacagatggtgtagctggaatgggattaaaaactgctttacgt
tatttgcagaaatatcctgaacctcgggcagctattcgtgcaatgagacttgataaaagc
cttaaagttccagtatcttttgaaaaggagtttgcacttgctgacctagcctttcgacat
caacgtgtatattgtccgaaagacaaaactctagttcatctgagtcctcctgaaagggaa
ctttctgtacatgaggatgcatttataggctcattttttgataatcagttggctattgat
atagcagagggaagatctaatccaattacgaaatgtgcttttgatatcaaggattcgtct
atgcaatcatttaccaaaactacaattactattagtaaacgaaagggtatatcaaagacg
gatatttccaacttttttatgaaatctattcctccttctaaacgtcctaccaaaagcacg
agccttattgatgttaccaacgtcaaagtgcaacgaactcatttagcaaatgatatttca
tccgaaaaacaatcaatcaaatctgcgaatgaaaaagcatatgttactccaaaatcaaat
tctttaaaaccaggttttggaaaatcactttccgatatctctaattcagcgacaaagaat
gaaaatgtccctttccttcctccgagaacaggtgttagtaaatattttaaacttcaaaaa
aatactgaaaaagaaattgatgagcaagtacctagtcaatccaacaatacaactccaaca
tctgctaaatcagattctgcttcaccccaaaattggttttcttcattctcttaccaaaca
ccgaattctgcttcacccccgttttcttcactatctcatacactcccaatttcagcactt
gctaaaattggtcatgatgcgttaaaccgcaaaaatcatgcctctcttccgtctcgtcgg
attgtgtataagccaccgtctagtccctcaaccccaatatctatgaatcctagacctaaa
ggaatcctatcacttcagcaatataaatttcgttag
DBGET
integrated database retrieval system
