Schizosaccharomyces pombe (fission yeast): 2540396
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Entry
2540396 CDS
T00076
Symbol
tma20, SPOM_SPBC31F10.12
Name
(RefSeq) RNA-binding protein Tma20
KO
K07575
malignant T-cell-amplified sequence
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2540396 (tma20)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
2540396 (tma20)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pre-PUA
PUA
KH_TffA
BSD
Motif
Other DBs
NCBI-GeneID:
2540396
NCBI-ProteinID:
NP_596574
PomBase:
SPBC31F10.12
SPBC31F10.12.1
UniProt:
P87313
LinkDB
All DBs
Position
II:join(3773308..3773318,3773373..3773525,3773581..3773678,3773795..3773999,3774059..3774116,3774192..3774212)
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AA seq
181 aa
AA seq
DB search
MFKRFNSREDIKGTTPIKSSIQRGIKAKLVQAYPNLKQVIDELIPKKSQLTQIKCEDRLF
LYTLNGEIILFQHFDGPIIPSLRLVHKCPDAFTQVRVDRGAIKFLLSGANIMIPGLVSKG
GNLPDDIEKDQYVIVTAEGKEAPAAIGLTKMSAKEMKETNKGIGIENVHYLGDNLWKTIL
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacgatttaactctagagaagatataaagggaactactccaatcaagtcttct
attcaaagaggaataaaagcaaaactagtacaagcttatcctaacttaaaacaagttatc
gatgagttaattcccaaaaaatcacaactaactcaaataaaatgtgaggatcgtttattt
ttgtatactttgaatggcgaaattatccttttccagcacttcgacggccctatcattcct
tctcttcgtcttgttcataaatgtccggatgcctttactcaagttcgagtagacagagga
gctatcaaattccttctctcgggtgccaatattatgattcctggcttggtttccaaaggc
ggcaatttgcctgatgacatcgaaaaagatcaatatgtgattgttacagctgagggaaag
gaagcccctgctgcaattgggcttacaaaaatgtctgctaaagaaatgaaagagactaat
aaaggaatcggcatagaaaatgtgcattatcttggcgacaacttgtggaagactatttta
gaataa
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