Schizosaccharomyces pombe (fission yeast): 2540426
Help
Entry
2540426 CDS
T00076
Symbol
rfc1, SPOM_SPBC23E6.07C
Name
(RefSeq) DNA replication factor C complex subunit Rfc1
KO
K10754
replication factor C subunit 1
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03030
DNA replication
spo03410
Base excision repair
spo03420
Nucleotide excision repair
spo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
2540426 (rfc1)
03410 Base excision repair
2540426 (rfc1)
03420 Nucleotide excision repair
2540426 (rfc1)
03430 Mismatch repair
2540426 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
2540426 (rfc1)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2540426 (rfc1)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
2540426 (rfc1)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
2540426 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
AAA_14
RuvB_N
AAA_5
SAGA-Tad1
AAA_33
AAA_30
AAA_16
AAA_18
Sigma54_activat
AAA_28
BRCT_2
DUF2140
AAA_17
NTPase_1
Motif
Other DBs
NCBI-GeneID:
2540426
NCBI-ProteinID:
NP_596607
UniProt:
O60182
LinkDB
All DBs
Position
II:complement(join(3852962..3855515,3855576..3855635,3855684..3855802,3855871..3855942))
Genome browser
AA seq
934 aa
AA seq
DB search
MSNSDIRSFFGGGNAQKKPKVSPTPTSPKPKRSLKKKRIVLSDDEDGTIENSKVPASKSK
VQKRNESEDISHSLPSIVHEDDKLVGSDGVSTTPDEYFEQQSTRSRSKPRIISNKETTTS
KDVVHPVKTENFANDLDTTSDSKPVVHQTRATRKPAQPKAEKSTTSKSKSHTTTATTHTS
RSSKSKGLPRFSDEVSQALKNVPLIDVDSMGVMAPGTFYERAATTQTPGSKPVPEGNSDC
LSGISFVITGILETLTRQEATDLIKQYGGKVTGAPSVRTDFILLGENAGPRKVETIKQHK
IPAINEDGLFYLITHLPASGGTGAAAQAAQQKKEQEEKKILETVARMDDSNKKESQPSQI
WTSKYAPTSLKDICGNKGVVQKLQKWLQDYHKNRKSNFNKPGPDGLGLYKAVLLSGPPGI
GKTTAAHLVAKLEGYDVLELNASDTRSKRLLDEQLFGVTDSQSLAGYFGTKANPVDMAKS
RLVLIMDEIDGMSSGDRGGVGQLNMIIKKSMIPIICICNDRAHPKLRPLDRTTFDLRFRR
PDANSMRSRIMSIAYREGLKLSPQAVDQLVQGTQSDMRQIINLLSTYKLSCSEMTPQNSQ
AVIKNSEKHIVMKPWDICSRYLHGGMFHPSSKSTINDKLELYFNDHEFSYLMVQENYLNT
TPDRIRQEPPKMSHLKHLELISSAANSFSDSDLVDSMIHGPQQHWSLMPTHALMSCVRPA
SFVAGSGSRQIRFTNWLGNNSKTNKLYRMLREIQVHMRLKVSANKLDLRQHYIPILYESL
PVKLSTGHSDVVPEIIELMDEYYLNREDFDSITELVLPADAGEKLMKTIPTAAKSAFTRK
YNSSSHPIAFFGSSDVLPMKGSAQREVPDVEDAIEAEDEMLEEASDSEAANEEDIDLSKD
KFISVPKKPKKRTKAKAEASSSSSTSRRSRKKTA
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattctgacattcgaagcttctttggaggagggaacgctcaaaaaaagccaaaa
gtctcaccgactcctacttccccaaaaccaaaaaggagtttgaagaaaaaaagaatcgtt
ttatcagatgatgaagatggtacaatagagaattcaaaagttcctgcatccaaaagcaaa
gtgcaaaaacgtaatgagtcggaagatatttcccattctttgccatccattgttcatgaa
gacgataaacttgtcggttcagatggagtttcaactacacctgatgagtactttgaacaa
cagtctactcggtcacgttctaaaccgcggattatctccaataaagaaactactacttcc
aaagatgtcgtacatcctgtaaaaacagaaaattttgccaatgacttggataccacttca
gacagtaagccagttgtccatcaaactagagctacacgtaaacctgctcaacctaaagca
gaaaaatcgacaacttcaaagtcaaaatctcataccacaactgcgacaactcacacaagt
cgttctagcaagtcgaaaggcttacctaggttctcagacgaagtttcccaagccctcaaa
aatgttcctttaattgacgtagactctatgggtgtgatggctccaggtactttctatgaa
cgggcggctacaacacaaactccaggctcaaaacccgtccctgaaggcaatagcgattgt
ctctcgggaattagctttgttattacaggaattctagagactttaactagacaagaggct
acagacctgatcaaacaatatggtggaaaagtgacaggtgcaccttctgttagaacagac
tttattctcttaggtgagaatgctggtccaagaaaagtggaaacaattaaacaacacaag
attcctgctattaacgaggatggactcttctatcttataactcatcttcctgcttcagga
ggaacgggtgctgcggctcaggctgctcaacagaaaaaggaacaagaagaaaagaaaatc
cttgaaactgttgcgagaatggacgatagtaataaaaaggaatcacaaccttcacagata
tggacttcaaaatatgcgccaacttctttaaaggatatttgtggtaataagggtgtcgtt
caaaaacttcaaaagtggctacaggattaccacaaaaacaggaagtccaactttaataaa
cctggacctgatggtctgggtctatacaaagccgtattactctctggtcctccaggtatt
ggcaagacgactgctgctcatttggtagcaaaattagaaggttacgatgttttggaactg
aacgctagtgacactagaagcaagcgcttgctagatgagcagctgttcggtgtgacagat
agtcaatcacttgccggctactttggcacaaaagctaaccccgttgacatggcaaagtcc
cgacttgtactcattatggacgaaatcgatggcatgtcatcgggtgatcgtggaggcgtt
ggtcagttgaatatgattattaaaaaaagcatgataccaattatttgtatttgcaatgac
cgtgctcatccaaagctgcggccccttgaccgtactacgtttgacctccgtttccgtcgg
ccagatgctaattcaatgcgatcccgaataatgtctatagcgtatcgtgaaggtctcaaa
ttgtcaccacaagcagtcgatcaactggttcaggggacgcagtccgatatgcgccaaatt
attaatttgctatccacttacaagttaagctgttcagaaatgacacctcaaaatagccaa
gctgttattaaaaattctgaaaagcatatcgttatgaaaccatgggatatctgtagtcgt
tacttacatggaggaatgtttcatccatcaagcaagtccaccattaatgataaattagag
ctgtattttaatgatcacgaattttcttatcttatggttcaagaaaactaccttaatact
acaccagatagaattcgtcaagaaccaccgaaaatgtcacatttgaagcatttagaatta
atatctagtgctgctaactccttttccgactctgatcttgttgattcaatgattcatggt
cctcaacaacactggtcacttatgccaacccatgctcttatgtcttgcgtgcgacctgct
tctttcgtggctggttccggttccaggcagattcgctttactaattggttgggtaataac
tcgaagacaaataaattatatcgtatgcttcgtgagatacaagtacacatgcgtttaaaa
gtatccgctaataaattggacttgcggcagcattatattccaatattgtatgagtctctg
cctgtaaagctatcaacaggccattcagacgtcgttccagaaatcattgaattgatggat
gaatattatctaaatcgtgaagattttgattcaataacggaattagttcttcctgcagat
gcaggtgagaaactcatgaaaaccataccgactgctgcaaaatctgcattcacaagaaaa
tacaattcttcgagtcaccccatcgccttctttggaagtagtgatgttttacctatgaag
ggctctgctcagcgcgaagtgccggatgtcgaagatgcaattgaagccgaagatgagatg
ttagaagaagctagtgactcagaggctgctaatgaagaggacatagatttaagcaaagac
aaatttatttcggtaccaaagaaacctaaaaaaaggactaaggcaaaggctgaagcgtcc
tcttctagctcaaccagtcgccgatccagaaaaaagacagcttaa
DBGET
integrated database retrieval system
