Schizosaccharomyces pombe (fission yeast): 2540481
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Entry
2540481 CDS
T00076
Symbol
rhp23, SPOM_SPBC2D10.12
Name
(RefSeq) UV excision repair protein rhp23
KO
K10839
UV excision repair protein RAD23
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03420
Nucleotide excision repair
spo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
2540481 (rhp23)
09124 Replication and repair
03420 Nucleotide excision repair
2540481 (rhp23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
spo03051
]
2540481 (rhp23)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2540481 (rhp23)
Proteasome [BR:
spo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
2540481 (rhp23)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
2540481 (rhp23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Dsc3_N
Rad60-SLD_2
UBA_9
MCM_N
Ubiquitin_5
TBK1_ULD
MJ1010-like_2nd
DUF3135
EAD1
Motif
Other DBs
NCBI-GeneID:
2540481
NCBI-ProteinID:
NP_596231
PomBase:
SPBC2D10.12
SPBC2D10.12.1
UniProt:
O74803
LinkDB
All DBs
Position
II:join(2986964..2987032,2987073..2987145,2987187..2988028,2988076..2988144,2988197..2988250)
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AA seq
368 aa
AA seq
DB search
MNLTFKNLQQQKFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEY
NIKEQDFIVCMVSRPKTSTSTPKSAASPAPNPPASVPEKKVEAPSSTVAESTSTTQTVAA
AAPSNPDTTATSEAPIDANTLAVGAQRNVAVENMVEMGYERSEVERAMRAAFNNPDRAVE
YLLTGIPEDILNRQREESAAALAAQQQQSEALAPTSTGQPANLFEQAALSENENQEQPSN
TVGDDPLGFLRSIPQFQQLRQIVQQNPQMLETILQQIGQGDPALAQAITQNPEAFLQLLA
EGAEGESALPSGGIQIQITQEESESIDRLCQLGFDRNIVIQAYLACDKNEELAANYLFEH
GHESEDEP
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgacattcaaaaatctacagcagcagaaatttgttatttctgatgtttctgca
gataccaaaatttcagaattaaaagaaaaaattcaaacgcaacagaattatgaagtcgaa
cgtcaaaagttaatttactcaggtcgaatccttgctgatgacaaaactgttggcgaatac
aatataaaagaacaggatttcattgtatgcatggtttcacgacccaaaacttccacctct
actccgaaatcagctgccagtcctgcccccaatcctccggcttccgtacctgaaaagaaa
gttgaagctccttcttctaccgtggcggaatctacctctactacacaaactgttgctgct
gctgccccttcaaacccagatactactgccactagtgaagcaccaatagacgccaacaca
ttggcagttggtgctcaacgaaatgttgctgtcgaaaatatggtagaaatgggatacgaa
cgcagcgaagttgaaagagccatgcgtgccgcttttaacaaccctgatcgggcagtggaa
tacttattaactggtattcccgaagacattctcaatcgacagagagaagagagtgctgca
gcccttgctgctcagcaacagcaaagcgaagcccttgctcctacttccactggccagcca
gcgaatctttttgaacaagctgctttatcagaaaatgaaaatcaagaacaaccttctaat
accgttggtgatgaccctctaggcttccttcgtagcattcctcaatttcaacagctaaga
caaattgttcaacaaaatccacagatgttggaaactatattgcaacaaattgggcaggga
gatcctgcattggctcaagctattacgcaaaatcctgaagcatttttgcaattattggcg
gagggtgccgaaggcgagtctgccttaccttctggtggaattcagattcaaattactcaa
gaagaatctgagagtattgatagattatgtcaacttggcttcgacagaaacattgtaatt
caggcttatttagcttgtgataaaaatgaagagcttgctgctaattaccttttcgagcat
ggacatgaatctgaggatgaaccttaa
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integrated database retrieval system
