Schizosaccharomyces pombe (fission yeast): 2540591
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Entry
2540591 CDS
T00076
Symbol
sen34, SPOM_SPBC19C7.07C
Name
(RefSeq) tRNA-splicing endonuclease catalytic subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spo03016
]
2540591 (sen34)
Enzymes [BR:
spo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
2540591 (sen34)
Transfer RNA biogenesis [BR:
spo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
2540591 (sen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
PB2_627-dom
CNOT1_CAF1_bind
tRNA_int_endo_N
DUF6657
Motif
Other DBs
NCBI-GeneID:
2540591
NCBI-ProteinID:
NP_596163
PomBase:
SPBC19C7.07c
SPBC19C7.07c.1
UniProt:
O60156
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All DBs
Position
II:complement(2834178..2835032)
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AA seq
284 aa
AA seq
DB search
MEDEKFPISYVHGKFLVFDVQAVEVFRKNYHILGTLVGTLPQLPQQNVFLGLPMELSKEE
AFYLIEKGISYIVDDTKVHKQLLENTTKDDVKQCLKKRQSLAYDQMIAAKKKENEKKIEI
MKKLGRTLPLDPLNYDEHDSFDLSWIPVDTVTTRIAEKSSMNDDFHKEEDVFENLDINRY
LMFKSLVDTGFYLNPGLRFGCQFVAYPGDALRYHSHYLVNSYKWDQEIPVLFLIGGGRLG
TAVKKTWLIGGSNDRNINMNGEKSKEELLLLPVRHFSIEWAGFG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgagaagttcccaatatcttacgttcatgggaagttccttgtttttgacgtt
caagcagtagaagtatttcgtaaaaattatcatattcttggtacgctagttggaactctg
ccacagttgccgcaacaaaatgtatttctaggccttcccatggaattatctaaagaagaa
gctttttacttaattgaaaaaggaatttcttatatagttgatgatacgaaggtgcataag
caactccttgaaaatacgactaaagacgatgtgaaacagtgtttaaaaaaacgccagtca
ttggcatatgatcaaatgattgcggcaaaaaagaaagaaaacgaaaagaaaattgaaata
atgaaaaaattgggtcggactctaccacttgatcctttgaattatgatgaacacgattca
tttgatttatcctggataccagtggacactgttactaccagaattgctgagaagtcatca
atgaatgacgactttcacaaagaggaagatgttttcgaaaatttagatataaatagatac
ctgatgtttaagtccttggttgatacaggtttctacttgaatcctggtttgcgttttgga
tgtcaattcgtagcttaccctggtgatgcattaaggtatcattctcactatctagttaat
tcttataaatgggaccaggagataccagtccttttcttgattggtggtggacgtcttgga
acagcagtaaaaaaaacatggttgatcggaggcagtaatgatcgaaacatcaatatgaat
ggggaaaagtctaaggaagaactattactattaccagttcgtcatttttccattgaatgg
gctgggtttggctaa
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