Schizosaccharomyces pombe (fission yeast): 2540597
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Entry
2540597 CDS
T00076
Symbol
gcn20, SPOM_SPBC29A3.09C
Name
(RefSeq) AAA family ATPase Gcn20
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
spo03012
]
2540597 (gcn20)
Translation factors [BR:
spo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
2540597 (gcn20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
AAA_30
MMR_HSR1
AAA_16
MeaB
AAA_18
AAA_14
RsgA_GTPase
Dynamin_N
AAA_28
NPHP3_N
AAA_23
ATP-synt_ab
KAP_NTPase
WbqC
DUF87
DO-GTPase2
AAA_15
Motif
Other DBs
NCBI-GeneID:
2540597
NCBI-ProteinID:
NP_595837
PomBase:
SPBC29A3.09c
SPBC29A3.09c.1
UniProt:
O59672
LinkDB
All DBs
Position
II:complement(2054214..2056424)
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AA seq
736 aa
AA seq
DB search
MEQVIQNNCSEVDPHVLSYCTGYANDAIKDVDEASDHTISLIRNLLLDAGAREEAVQLIQ
NELEKQFKEREEHLDTLQTNGLVRLKETIRMDSQSEISSTMGLVGEKMELDAVKGRKVES
RVDRRKLEKAERKIRAKWEKRTIKAEYESSKLVQPEQKSYEEFYMAVNPLDLSGSNQGKS
KDIKIDGIDLAFAGHRILTGASLTLAQGRRYGLTGRNGIGKSTLLRALSRREIAIPTHIT
ILHVEQEMTGDDTPALQSVLDADVWRKYLIQDQEKITNRLSTIEKELEELSKDQTADQAI
SRRLERERDELDLRLLDIQNKLSEMDSDRAESRAATILAGLGFTQEMQSHATKTFSGGWR
MRLSLARALFCQPDLLLLDEPSNMLDVPSIAFLSEYLQTYKNIVLVVSHDRSFLNEVATD
IIHQHSERLDYYKGNFSQFYATREERCKNQLREYEKQMEYRKHLQSFIDKFRYNAAKSSE
AQSRIKKLEKLPILEKPQTEEEVEFEFPPVEKISPPILQMSDVNFEYVPGHPILKHVDID
VQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTSGIVSRHPRLRIAYFAQHHVDTLDLNLNA
LSFLAKTFPGKGEEEYRRHLGAFGVSGPLALQKMITLSGGQKSRVAFACLGLQNPHILIL
DEPTNHLDMESMDALTRAVKRFQGGVILVSHDVDFLDKTCTSIWQCDHNVVSKFDGTISQ
YKKFCLSQQPTMTIKT
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagtcattcagaataattgctctgaagtagaccctcatgtcctcagctactgc
actggatatgctaatgatgctattaaagatgtagatgaggcttcagaccatacgatctct
ctcattcgtaatttattgctagatgctggcgctcgtgaggaagcggtacagctcatacaa
aacgaactagagaaacaatttaaagaaagagaggaacatctagatacattacaaacgaat
ggacttgttcgtttgaaggagactattcgaatggattcccaatccgaaatttcgtcaact
atgggtttggttggcgaaaagatggaattagatgctgtaaagggccgtaaggttgaatct
agggtagatagaagaaaattagagaaggctgaacggaagattcgtgccaaatgggagaaa
cgtactatcaaagcagaatacgaatcttcaaagttggttcaacccgaacaaaagtcttat
gaagagttttacatggctgtaaatcctctagatttatccggaagtaaccaaggaaaatcg
aaagatattaaaattgatggaattgatcttgcttttgctggtcatcgtatattgactggt
gcttcgttgacacttgcacagggtagacgatacggtttaactggtcgcaacggtatcggt
aaatctactcttctacgtgctctttctcgccgtgaaattgcgattcctacccatattacc
attcttcatgttgagcaagaaatgacaggtgatgatacacctgccctacagtcagttttg
gatgccgatgtttggcgcaagtatttgattcaggaccaggaaaagataactaatcgtcta
tcaacgattgaaaaagaattggaagaacttagtaaagaccaaactgctgatcaagctatt
tcccgtcgccttgagcgtgaacgagacgaacttgatttacggttgttagatattcaaaat
aagctttccgagatggactctgatagagcagaatcacgcgctgctactattttagctggt
cttggatttactcaagaaatgcaaagccatgctaccaagactttttcaggtggttggcgt
atgcgtttgtcattggcacgtgctctgttttgtcaaccagatttactacttttggatgaa
ccttcgaacatgcttgacgttccctcaattgctttcttatctgaatatttacaaacttat
aaaaatatcgttttagtcgtttcacacgatcgttctttcttgaatgaagttgctactgat
attattcatcaacactctgagcgcttggattactataagggtaattttagtcaattctat
gctactcgtgaagaacgttgcaaaaatcaacttcgtgaatatgaaaagcaaatggaatac
cgcaaacatttgcaatcattcattgacaaatttcgttataatgctgccaaatcatccgaa
gcacaaagtcgtattaagaagttggaaaaactgccgatccttgaaaagcctcaaactgag
gaagaagttgagtttgaatttccacctgtggaaaaaatatctcctcctatcttacaaatg
tctgatgtcaattttgagtatgttccaggtcaccctattctcaaacatgttgatattgat
gttcaaatggattctcgtatcggtgtggttggtcccaacggtgctggtaaatcaacaatg
cttaagcttcttatcgaacaacttcatccaacatctggtatagttagtcggcacccccga
cttcgtattgcatactttgcacaacatcatgtcgatactttggacttaaacttgaatgcc
ttaagctttttagctaagacatttcctggcaaaggtgaagaagaataccgtcgtcatctt
ggcgcttttggtgttagtggacctcttgcattgcaaaaaatgatcacgctttctggtggt
cagaaatctcgtgttgcgttcgcatgcctaggtctacaaaaccctcacattcttattcta
gatgaacccaccaaccatctggatatggagtccatggatgccttgacaagagctgttaaa
cgcttccaaggtggtgtgattcttgtttctcacgatgttgatttcttggacaagacatgt
accagtatttggcagtgtgaccataatgtcgtctccaagtttgatggaacaatttcacaa
tataagaaattctgtctatctcaacagccaaccatgactataaaaacttaa
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