Schizosaccharomyces pombe (fission yeast): 2540611
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Entry
2540611 CDS
T00076
Symbol
syf2, SPOM_SPBC3E7.13C
Name
(RefSeq) SYF2 family splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2540611 (syf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spo03041
]
2540611 (syf2)
Spliceosome [BR:
spo03041
]
Complex B
Other components
Prp19-related factors
2540611 (syf2)
Complex C
2540611 (syf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
2540611
NCBI-ProteinID:
NP_596100
PomBase:
SPBC3E7.13c
SPBC3E7.13c.1
UniProt:
O59733
Structure
PDB
PDBj
LinkDB
All DBs
Position
II:complement(join(2684012..2684635,2684685..2684750))
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AA seq
229 aa
AA seq
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MDSPSHSREARVEKLKKIREQMRKSSHENRKEVVQEHSRMRIDPALERRLERKRMEAEEE
LAKIETEEEGGDFERRRAWDWTIEESEKWDQRLRKKKQTIQNVAFSDYHSQASKDYNRGI
RDLKPDYEKYDKDKKEEKSKSRSVALYDEAERLDWVSNKPDKEHVERLVESIKKQDQRRL
KNTKRRGTDEEDHITFINERNRKFNLKLQRFYSKYTKDIKEDLERGTAL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggactcgccttctcactcacgtgaagcacgagttgaaaaactaaaaaaaattcgtgaa
caaatgaggaaatcttctcatgaaaatcgtaaagaggtagtacaagagcattcacgaatg
cgcattgatcctgctttggagcggcgactcgaacgaaaacgaatggaggcagaggaagag
cttgctaaaatcgaaactgaggaagaaggaggagactttgaaagacgaagagcttgggat
tggacgattgaagaaagcgagaagtgggatcagcgattacgaaagaaaaagcaaacaatt
cagaatgtggcattctcagactatcattctcaagctagcaaagattacaaccgtggcata
agagatctgaagccggattatgaaaagtatgacaaggataaaaaagaagaaaaaagcaag
tctcgatccgtcgctttatatgacgaagcagagcgtttggactgggtgtcaaataaacct
gataaggaacacgtcgaacgtttagtggaaagtattaaaaaacaagaccaacgaaggtta
aaaaataccaaacggcgtggtacagatgaggaagaccatattacatttatcaacgaacgt
aacagaaagttcaacctcaaacttcagagattttactcaaaatacacgaaagatattaag
gaagatctggaacgaggtacggctctttaa
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