Schizosaccharomyces pombe (fission yeast): 2540656
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Entry
2540656 CDS
T00076
Symbol
ssn6, SPOM_SPBC23E6.09
Name
(RefSeq) transcriptional corepressor Ssn6
KO
K06665
general transcriptional corepressor CYC8
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04011
MAPK signaling pathway - yeast
spo04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
2540656 (ssn6)
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
2540656 (ssn6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2540656 (ssn6)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
2540656 (ssn6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_14
TPR_12
TPR_16
TPR_19
TPR_11
TPR_7
TPR_6
TPR_9
ANAPC3
ARM_TT21_C
TPR_Slam
TPR_15
ARM_TT21_5th
ARM_TT21_N
ARM_TT21_4th
ChAPs
TPR_EMC2
TPR_NUP120_160
Motif
Other DBs
NCBI-GeneID:
2540656
NCBI-ProteinID:
NP_596609
PomBase:
SPBC23E6.09
SPBC23E6.09.1
UniProt:
O60184
LinkDB
All DBs
Position
II:3863505..3866813
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AA seq
1102 aa
AA seq
DB search
MPQSQVATASPSQNAQPNHGMGSKVLSSDPNASLPPQTAYYASPLHANSVSLPPSHLPRS
TLHPLLSQQQQPAQQSPSLGPAQQNIQQPPSVSIASQPHYAEAIVPIQQVLQPQQYRQLP
PNMVAATNAPQQHPQLQRMMPILSSNQPIQQLPLPNQASPYIPVPLQQQQQSQPQQQPQQ
QQHQQPQQPQPPQQPLQQQQQQRQLHSGIQQPVSTIVSQNGTYYSIPAVNHPMAGQPIAI
APVPAPNQAALPPIPPQALPANGTPNTLASPVTLPAANSAVQNAQPVPMTSSPAMAVVPQ
NKTAATSTLAAQQGANVLPPNAPESVRHLISLNEETWIQIGRLAELFDDQDKALSAYESA
LRQNPYSIPAMLQIATILRNREQFPLAIEYYQTILDCDPKQGEIWSALGHCYLMQDDLSR
AYSAYRQALYHLKDPKDPKLWYGIGILYDRYGSHEHAEEAFMQCLRMDPNFEKVNEIYFR
LGIIYKQQHKFAQSLELFRHILDNPPKPLTVLDIYFQIGHVYEQRKEYKLAKEAYERVLA
ETPNHAKVLQQLGWLCHQQSSSFTNQDLAIQYLTKSLEADDTDAQSWYLIGRCYVAQQKY
NKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDAYSRAIRLNPYISEVWYDLGT
LYESCHNQISDALDAYQRAAELDPTNPHIKARLQLLRGPNNEQHKIVNAPPSNVPNVQTA
KYINQPGVPYSNVPVAQLSGNWQPPHLPQAQLPSATGQSGVVQQPYQTQPSVTNNNVATQ
PVIASTVPVQTAAPSSQTAVPQTIHQSNAFTPRGKHASGSRNSISSTKSPQHKLSDQPRS
RNNSISNVSHRERSNSVSSKSRETRTSASNESDPKKSTQRDSSKKLENSTVVSGSPSSSS
KSDAAKSIKPQKPEPALKPVEGTADPKSTKRNHQETEKTADTDVSSTEPVKRQKTADVND
DVGEEEVKQSVSEQVDSAQLTSEPKSESLPKSPEEKSDDTSNDVTTENTNDINGDSNMDN
VATVDKSTDAVDTSTATVAATTTTAEEELPQKESQERSSPSPENQDSTPLAPKSVSPKQA
ARTLDIDENYDDDEGEKETVSV
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgccccaatcacaagtcgctactgcttctccttcccagaatgcacagcccaaccatggc
atgggctcaaaagtcctctcgtccgacccaaatgcttcgctgccccctcagactgcttac
tacgcttcacccctccatgccaattctgtttcccttcccccttctcatcttcctcgttcc
acattgcatcctctactatctcaacagcagcaacctgcccagcagtctccctctttaggc
cctgcccagcaaaacattcaacaaccaccctctgtctctattgcatcccagcctcattat
gctgaagccattgttcccattcagcaggttctacaacctcaacaataccgacaacttcct
ccaaacatggttgctgctacgaatgcacctcagcagcatcctcagttgcaacgaatgatg
cccatactctcttccaaccaacccattcaacagctaccccttcccaaccaggcttctcct
tacattcccgttcccctgcaacagcaacaacaatcgcaaccccaacaacagcctcaacag
caacaacatcaacagcctcaacaaccgcagccgcctcagcagcctttgcagcaacaacaa
cagcagcgtcagttacattctggtattcagcagcccgtctctacaatagtttctcaaaat
ggtacttactattcgattcctgccgtcaatcatccaatggctggccaacctattgctatt
gcccccgttcctgctccaaaccaggctgcattgcctcccattcctccacaggctcttcct
gcaaatggcaccccaaacaccttggccagtccggtgacccttcctgcagcaaattccgct
gttcaaaatgcccagcctgttcccatgacttcttctcctgctatggctgttgtacctcaa
aataaaaccgcagctacttctacgcttgctgctcaacaaggcgccaatgtgctgccgccc
aacgctcctgaatctgttcgtcatttaatttcacttaacgaggaaacttggattcagatt
ggccgtcttgcagagctatttgatgatcaggataaagccctttctgcttatgagtccgct
ttgcgccagaacccatattcgattcccgctatgcttcaaattgctaccatattacgaaac
cgcgagcaatttccgcttgccattgaatattaccaaactattttagactgtgatcctaag
cagggtgaaatttggagtgctttaggtcactgttatttgatgcaggatgatctttctcgc
gcttattccgcctatcgtcaagctttgtaccatttgaaagatcccaaagatccgaaacta
tggtacgggatcggtattttatacgaccgttatggctctcatgagcatgctgaggaggca
tttatgcaatgcttacgcatggatcccaacttcgagaaggttaatgaaatatattttcgt
ttgggaatcatttacaaacagcagcataaatttgcccaatcgttagagctttttcgtcac
atccttgataatccccctaagcctttaaccgtcttggacatatacttccaaattggtcac
gtatacgagcaacgaaaagagtataaattagccaaggaagcgtatgaacgtgtcttagct
gaaactcccaatcatgccaaggttctacagcaactcggatggctgtgccatcaacagtca
tcttcgtttactaaccaggatcttgctatacaatatctgactaaatctttagaagcagat
gacactgatgctcagtcttggtatctgataggtcgttgttatgtggcacaacaaaaatac
aacaaggcatatgaagcgtatcaacaagctgtgtatcgtgatggtagaaatcctaccttt
tggtgctcgattggtgttttgtattatcaaatcaaccaatatcaagacgccttggatgct
tattcccgtgctattcgcttaaatccttacatctcggaagtctggtatgacttgggtact
ttgtacgagagttgtcataatcaaataagtgatgcgcttgatgcttatcagcgtgctgct
gaattggaccccactaatcctcacatcaaggcaaggttacaattgttacgtggacctaat
aatgaacaacataaaattgtcaacgctcctccttccaatgtcccaaacgtacagactgca
aagtatatcaaccagccaggcgtgccttactctaatgttcctgttgctcagttgtcgggt
aattggcaacctccacacttacctcaagctcaacttccttctgctaccggtcaatcaggc
gtcgtgcaacagccttaccaaacacaaccgtcagttactaataacaacgtggctactcag
ccagtaattgcttctactgttcctgtacaaactgctgctccatcgagccagactgctgtg
ccacagactatacaccaatctaatgcttttactcctcgaggcaagcacgcttcaggttct
cgaaattctatttcgtctaccaagtctcctcaacataagttatcagatcagccgcgttca
cgcaataattctatttctaatgttagtcatcgtgaacgtagcaattcagtttctagtaaa
tcaagggaaacgaggacttcagcttcgaatgaaagtgatcctaaaaaatctactcaacgt
gattcctctaaaaagctggagaatagcacagttgttagtggatcacctagttcaagctca
aaatctgatgctgctaagagtattaaaccacaaaaacccgagcctgctttgaaaccggtt
gaaggcacagctgatccaaagagtaccaagcgtaatcaccaggagactgagaaaactgct
gatactgacgtttcttcgacggagccagtaaagcgtcagaaaactgctgatgtaaatgac
gatgttggagaggaagaagttaagcagtcagtttctgaacaggtggattctgcacagttg
acttcggaacctaaaagtgagagtttacccaagagtcccgaagaaaagtcagatgatact
tctaatgatgttactactgaaaacactaacgatattaacggcgacagcaatatggataat
gtagctaccgttgataagtctacggatgctgttgatacatctacagctactgttgccgct
actactactactgcagaagaggaactgccccaaaaagaatcgcaagagcgtagctctcct
agtcccgaaaatcaagattcgacacctcttgccccaaaaagtgtgagtccaaagcaagca
gcaaggactctcgatattgatgaaaattacgatgatgatgagggagaaaaagaaaccgtg
tcagtttaa
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integrated database retrieval system
