Schizosaccharomyces pombe (fission yeast): 2540699
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Entry
2540699 CDS
T00076
Symbol
trm6, SPOM_SPBC800.08
Name
(RefSeq) translation initiation factor eIF-3 gamma subunit Gcd10
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spo03016
]
2540699 (trm6)
Transfer RNA biogenesis [BR:
spo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
2540699 (trm6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gcd10p
Motif
Other DBs
NCBI-GeneID:
2540699
NCBI-ProteinID:
NP_595109
PomBase:
SPBC800.08
SPBC800.08.1
UniProt:
Q9HGL4
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Position
II:join(265374..265468,265605..266898)
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AA seq
462 aa
AA seq
DB search
MLRHASTISENSSVFIKLPSDNVRFVTLKPNNTIHLGKFGSFLADDLFGKHFDETFEIYQ
PKKIRVLKTREVQYIEEEKKTNQELNDCRGNQLMTQEEIDELRANIKAGGLRAEEAIKQL
TNSSKTFEQKTLFAQEKYVTRKGEKYLQRFQVLRPCVEVVANYMIEHDPYKILDLTAECI
SLMLTLGNVKPGGRYLVVDETGCMFLGSLIDRVAGDCKITLVHPNEQPNSSCLEYWGQDF
KEDSLVQKGILKTLNWYQVTNPTETLSEYSVEDIPESELNEMKLRHRKRYETKKATFNRL
KNTIDDFESGNYDALFILSIHTPMSVLQHLLPKLGISRPFMVYSTYQQVLVETYHQLSKW
DNLFVEKTAQSTENDEKVDQGDVAIDTQKEKVIMLDIHEIRTRPYQVLPERTHPFMTVRG
DMGFVLSGIKVLTSDSNLAAGRFPKRKGQKETSSVKKAKLEN
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcatgcatcaactatttccgaaaacagcagcgttttcatcaagcttccttca
gacaatgttcgttttgtaacattgaaaccaaacaatacaattcacctcggaaaatttggt
tcatttctcgctgatgatttgtttggaaagcattttgacgaaacttttgaaatttatcaa
cccaaaaaaattcgagttttaaaaacaagggaggtacagtatatcgaggaagaaaagaaa
acgaatcaagaacttaatgattgtcgaggcaatcagcttatgactcaagaggagattgat
gaactgcgcgcaaacattaaagctggtggacttcgtgctgaagaggccatcaaacagttg
actaatagtagtaaaacttttgagcaaaaaactttatttgctcaggagaaatatgttacg
agaaaaggggaaaagtatcttcaacgctttcaggttttacgaccttgtgttgaagttgtg
gctaattacatgattgaacatgatccgtataagatacttgatcttactgccgagtgtata
agcttgatgcttactcttggaaatgttaaacctgggggtagatatttggtagttgatgag
actggatgcatgttccttggttctcttattgaccgtgttgctggtgattgcaaaataacc
ctggtccatccaaatgagcaacctaatagctcttgtttagagtattgggggcaagacttt
aaagaggatagtttggttcaaaaagggattttgaaaactttgaattggtatcaagttacg
aatccaaccgagactttaagtgagtattcggttgaagatattcctgaatcagagttgaat
gagatgaaacttcgccaccgtaagcgctatgaaacgaagaaagctacatttaaccgtttg
aagaatactattgatgattttgaaagtggtaactatgatgctctctttatactatctatt
cacaccccaatgtctgttcttcaacatcttcttccaaagctcggtatatcacgtcctttc
atggtatactcaacatatcagcaagtcttagtcgagacgtatcatcaattatctaaatgg
gataacttatttgtagaaaagacagctcaaagtactgaaaatgacgaaaaggttgatcaa
ggagacgttgctattgatacacagaaagagaaagtcatcatgctggatattcatgagatt
cgtacacgaccttaccaagtcttgccagaaaggactcatccattcatgactgttaggggt
gatatgggtttcgttttatctgggatcaaggtgttaacttctgacagcaatctagctgcc
ggaaggtttccaaaacgtaagggccagaaagaaacttcttctgtcaaaaaagcaaaattg
gaaaattag
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