Schizosaccharomyces pombe (fission yeast): 2540731
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Entry
2540731 CDS
T00076
Symbol
lcf1, SPOM_SPBC18H10.02
Name
(RefSeq) long-chain-fatty-acid-CoA ligase Lcf1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo00061
Fatty acid biosynthesis
spo00071
Fatty acid degradation
spo01100
Metabolic pathways
spo01212
Fatty acid metabolism
spo04146
Peroxisome
Module
spo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
2540731 (lcf1)
00071 Fatty acid degradation
2540731 (lcf1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
2540731 (lcf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spo01004
]
2540731 (lcf1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spo04147
]
2540731 (lcf1)
Enzymes [BR:
spo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
2540731 (lcf1)
Lipid biosynthesis proteins [BR:
spo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
2540731 (lcf1)
Exosome [BR:
spo04147
]
Exosomal proteins
Exosomal proteins of breast milk
2540731 (lcf1)
Exosomal proteins of breast cancer cells
2540731 (lcf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
2540731
NCBI-ProteinID:
NP_595726
PomBase:
SPBC18H10.02
SPBC18H10.02.1
UniProt:
O60135
LinkDB
All DBs
Position
II:join(1770093..1770111,1770238..1772249)
Genome browser
AA seq
676 aa
AA seq
DB search
MKVQSKAISKPKEHESAIYRNANFPDHLVETYSDDVHTLFDVFRHSVKQFGNKKAMGYRN
LVKEHVETKMVTKVVDGEKKEVPKSWSYFELSDYNYLSFNDIYDKALRYAGALRKLGLNK
GDKFELYAPTSAFWLLTAEACLSQSMTIVTAYDTLGEEGLLHSLRESGVRGMYTEGHLLK
TLVNPLKEIESLEVIIYRNDAKEEDIKTIQEIRPNLKLIKFADFEKMSPPVEPDPPSPEE
ICCIMYTSGSTGLPKGVILSHKNMVAIVTAIVKHVPEVTSKDYLLAYLPLAHILEFAFEN
ICLAWGGTIGYANVRTLVDTNCRNCKGDINTFRPTIMVGVPAVWEMVRKGIMSKLNAASA
VKRSVFWTAYYTKAKLMRHNLPGSCVLDTAVFNKIRSMGTGGRLRYTLSGGSALSPDTKR
FLSIVLCPMLIGYGLTEISAAAMVQNPACFNLDDSAGSLLPCTEMKLVDCEEGNYNSHGH
PPRGEIWLRGPSLTRGYLNRDKENKESFTPDGWFRTGDVGELTPEGLLRIIDRKKNLVKT
QNGEYIALEKLESRYRTSSLVSNICVYADQTKVKPLAIIVPNEPVVRKLATEQAGLSPDA
SWEEVCHNKKVRQLVYDDLIRIGRSHHFANIELIQNVVLVPIEFTPENGLVTAAQKLQRR
KILDRFKKEIDAAYAE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtacaatctaaggctatctcgaagccgaaagaacatgagtcagcaatctataga
aatgcgaattttcccgatcatttagtagaaacatatagcgatgatgttcatactctattc
gacgtttttagacattctgtcaagcaatttggtaacaagaaggctatgggatatcgcaac
ttggtgaaagaacatgttgagacaaagatggtcacgaaagtggtggacggtgaaaaaaag
gaggttcctaagtcctggtcttattttgagctttcagattacaattatctttcctttaat
gatatttatgacaaagcattgcgttacgccggtgctttacgtaaacttggtttaaataag
ggagacaaattcgaactgtatgctcctactagcgctttttggcttctcactgctgaggct
tgtttatctcaatcaatgacgatcgtaacggcatacgatactttgggtgaagagggtttg
ctccattctttgcgcgaatccggtgtccgaggaatgtatacagaaggacatctcttaaaa
actttggtcaatcccttgaaggaaattgaatcacttgaagtaatcatctaccgcaacgat
gccaaggaggaggacataaagacaattcaggagattcgtcctaacctcaaattgattaaa
tttgctgattttgagaaaatgtctcctcccgttgagcctgatccaccttcacctgaagag
atctgctgtattatgtacacttctggtagtaccggtttacctaagggtgtaattttgagt
cacaagaacatggttgcaattgtcactgctattgtcaagcacgttcctgaagttacctct
aaagattatcttttggcctaccttccattggcacacattctcgaatttgcgtttgaaaac
atttgtttggcttggggtggtaccattggctatgccaacgtccgtactttggtcgatact
aattgcagaaactgcaagggtgatatcaataccttccgtcccactatcatggttggtgtt
cccgctgtatgggaaatggtacgtaagggtatcatgagtaaattaaacgctgcctctgct
gttaagcgttcagttttttggactgcttattacactaaagcaaagttgatgcgtcacaat
cttcccggttcttgcgtattggataccgctgtattcaataaaattagatctatgggaacc
ggtggtcgtttaagatacactttatctggtggttctgccttatctcctgacaccaagcgc
ttcctttctatcgttctctgtcctatgttaatcggttatggtttgaccgaaattagtgca
gctgctatggttcagaaccctgcttgtttcaatttggacgattcagctggatctcttttg
ccttgtactgagatgaagttagttgactgtgaagagggcaactacaactctcacggacac
cctcctcgtggtgaaatctggcttcgtggtccctctttgactcggggatatcttaaccgt
gataaagaaaataaagaaagctttactccagatggttggttccgtactggtgatgttggc
gaattgactccagaaggattgcttagaattattgatcgtaagaaaaacctcgtcaaaact
caaaatggcgagtatattgcactggagaagcttgaatctcgctatcgtacgagcagtctt
gtttcgaatatctgtgtatatgcagatcagaccaaggtgaagcctttggcaatcatcgtt
cccaacgagcccgtcgttcgtaaacttgccactgaacaagccggtcttagtcctgatgcc
tcttgggaggaagtttgtcataacaagaaagttcgtcaacttgtttatgacgaccttatt
cgtattggtcgtagtcatcatttcgctaatatcgaacttattcaaaacgtcgtccttgtt
cccattgagtttacacccgaaaatggattggtgactgcagctcagaaattacagcgtcgc
aaaattttggatcgtttcaagaaggaaattgacgccgcttacgccgagtaa
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