Schizosaccharomyces pombe (fission yeast): 2540828
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Entry
2540828 CDS
T00076
Symbol
vps25, SPOM_SPBC4B4.06
Name
(RefSeq) ESCRT II complex subunit Vps25
KO
K12189
ESCRT-II complex subunit VPS25
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
2540828 (vps25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2540828 (vps25)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spo04147
]
2540828 (vps25)
Membrane trafficking [BR:
spo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
2540828 (vps25)
Exosome [BR:
spo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
2540828 (vps25)
Exosomal proteins of colorectal cancer cells
2540828 (vps25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ESCRT-II
WHD_CHMP7_1st
Motif
Other DBs
NCBI-GeneID:
2540828
NCBI-ProteinID:
NP_596423
PomBase:
SPBC4B4.06
SPBC4B4.06.1
UniProt:
O74967
LinkDB
All DBs
Position
II:join(3422568..3422757,3422813..3422961,3423006..3423194)
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AA seq
175 aa
AA seq
DB search
MRVPSIYNFPPFFTRQLNDNTWHSQKAAWQMWILLWCRENRQTSITINPELLESSLLHNS
TIHRTLPLSVFREIVEDMVKQNLAEWTEKRNPKDVFWVYWRSISEWGNMILKWLSDMGRE
GSICTFYELQEQYKEVDCLDEVLLHKVLELLMKKGNIELMKGSSGKYSGFKVLKA
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttccatccatttataactttcctcctttcttcacccgtcaattaaacgataat
acttggcattctcaaaaggcagcatggcaaatgtggatactattatggtgtcgtgaaaac
aggcaaacaagtataacgataaacccagaactgttagaaagttctttgcttcataacagt
acaattcatagaacgctgcctctttcggtgtttcgagaaatagtagaggatatggtgaaa
caaaacctagcagaatggactgaaaagcgaaatcctaaagacgtgttttgggtatactgg
aggtctatatctgaatgggggaatatgatcttgaaatggctatccgatatgggacgagaa
gggtctatatgtacattttacgaacttcaagaacaatataaagaggtagattgtttagac
gaagtactcctccataaagttcttgagctactaatgaaaaaaggaaatatcgaattaatg
aaaggatcgtctggaaaatatagcgggttcaaggtactgaaagcttaa
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