Schizosaccharomyces pombe (fission yeast): 2540828
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Entry
2540828 CDS
T00076
Symbol
vps25, SPOM_SPBC4B4.06
Name
(RefSeq) ESCRT II complex subunit Vps25
KO
K12189
ESCRT-II complex subunit VPS25
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
2540828 (vps25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2540828 (vps25)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spo04147
]
2540828 (vps25)
Membrane trafficking [BR:
spo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
2540828 (vps25)
Exosome [BR:
spo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
2540828 (vps25)
Exosomal proteins of colorectal cancer cells
2540828 (vps25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ESCRT-II
Motif
Other DBs
NCBI-GeneID:
2540828
NCBI-ProteinID:
NP_596423
PomBase:
SPBC4B4.06
SPBC4B4.06.1
UniProt:
O74967
LinkDB
All DBs
Position
II:join(3422568..3422757,3422813..3422961,3423006..3423194)
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AA seq
175 aa
AA seq
DB search
MRVPSIYNFPPFFTRQLNDNTWHSQKAAWQMWILLWCRENRQTSITINPELLESSLLHNS
TIHRTLPLSVFREIVEDMVKQNLAEWTEKRNPKDVFWVYWRSISEWGNMILKWLSDMGRE
GSICTFYELQEQYKEVDCLDEVLLHKVLELLMKKGNIELMKGSSGKYSGFKVLKA
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttccatccatttataactttcctcctttcttcacccgtcaattaaacgataat
acttggcattctcaaaaggcagcatggcaaatgtggatactattatggtgtcgtgaaaac
aggcaaacaagtataacgataaacccagaactgttagaaagttctttgcttcataacagt
acaattcatagaacgctgcctctttcggtgtttcgagaaatagtagaggatatggtgaaa
caaaacctagcagaatggactgaaaagcgaaatcctaaagacgtgttttgggtatactgg
aggtctatatctgaatgggggaatatgatcttgaaatggctatccgatatgggacgagaa
gggtctatatgtacattttacgaacttcaagaacaatataaagaggtagattgtttagac
gaagtactcctccataaagttcttgagctactaatgaaaaaaggaaatatcgaattaatg
aaaggatcgtctggaaaatatagcgggttcaaggtactgaaagcttaa
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