KEGG   Schizosaccharomyces pombe (fission yeast): 2540829
Entry
2540829           CDS       T00076                                 
Symbol
sum2, SPOM_SPBC800.09
Name
(RefSeq) translation initiation inhibitor
  KO
K18749  protein LSM14
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    2540829 (sum2)
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     2540829 (sum2)
SSDB
Motif
Pfam: LSM14 SM-ATX FDF DUF5320 API5
Other DBs
NCBI-GeneID: 2540829
NCBI-ProteinID: NP_595110
PomBase: SPBC800.09 SPBC800.09.1
UniProt: Q9HGL3
LinkDB
Position
II:join(267490..267542,267581..267639,267678..267859,267968..268954)
AA seq 426 aa
MTEFIGSRISLISKSDIRYVGILQDINSQDSTLALKHVRWCGTEGRKQDPSQEIPPSDNV
FDYIVFRGSDVKDLRIEEPATTPSAPPVQPPNDPAIIGSNSGQYNWNQAQTAQPPQPVQP
NPYGAPYQQAPPAGAPYYMYPNAPAQFVPPGGLPLGTPLDASTPAVPYYGAPDQQQMGQR
PEFAQNVSQGFAGQAPYNVRPGYGMPSNQKPPNFAPGMPAPGPTAVSASPSLQSMPPTNG
VIPGAQPSIEASIEKESTSIRNSTVTNDRVVNTTVDVSQSQTVETSGPSKEVPTTQPDAS
AAKPRTEFDFQTANQKFQSMKDDLLKGKNDEEAEEFYKPKQSFFDNISCESKEKGMEAAD
RRALRDRERSLNMETFGVAGSGNRGRRGRGRGRGGRGRGRGYARNQYNQYRNSNGSQPRA
QPANDQ
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgactgaatttattggttctcgtattagtctaattagcaaatctgacattcgttatgtg
ggcattttgcaggacatcaattcccaggactcaacactggctttgaagcatgtccgttgg
tgtggtactgaaggaagaaaacaagatccctctcaagaaatccccccatcagataatgta
tttgattacattgtttttcgtggaagcgatgttaaagatttacggattgaggaacctgct
actactccttctgctcccccggttcaacctcctaatgatcctgcaattattgggtctaat
agcgggcagtataattggaaccaagcgcagactgcccaacctcctcagcctgttcaacct
aacccttatggagctccataccaacaggctcctccagcaggtgcaccttactatatgtac
ccgaatgctcccgctcaatttgtacctcctggaggtttgcctttgggtactcccttagac
gcatccacacctgcggtcccgtattatggggcacctgatcaacagcaaatgggtcaacgt
cctgagtttgctcaaaatgtttctcaagggtttgccggtcaggccccgtacaacgtacgt
cctggatacggaatgccttcaaaccagaagcctcccaactttgctccgggcatgcctgct
cctggtcctaccgcggtatctgcatctccgtctcttcaatccatgccgcccacgaatgga
gtgataccaggtgcacagccctccattgaagcatctattgaaaaagaaagtactagtata
cggaattccactgtcacaaatgaccgtgttgtgaatactactgtggatgtctctcaatcc
caaaccgttgaaacatctggaccttctaaagaagttcctacaactcaacctgatgctagt
gctgcaaagcctcgtaccgaatttgactttcaaactgcaaatcaaaagtttcaatcgatg
aaagatgatttgttaaaaggaaaaaatgatgaagaagccgaagaattttacaagcctaag
caatctttttttgataatattagttgtgaaagtaaagagaagggtatggaagctgcagat
agaagagctctacgagatcgcgaacgttctttgaacatggagacatttggcgttgctggc
tctggaaatcgcggccgtcgtggacgtggtcgtggacgtggtggtagaggtcgtggacgt
ggatatgcaagaaatcaatataaccaatacaggaattccaatggctctcaacctagagcc
cagcctgcaaacgaccaatga

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