Schizosaccharomyces pombe (fission yeast): 2540836
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Entry
2540836 CDS
T00076
Symbol
vps38, SPOM_SPBC18H10.19
Name
(RefSeq) phophatidylinositol 3-kinase complex subunit Vps38
KO
K21249
UV radiation resistance-associated gene protein
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2540836 (vps38)
Membrane trafficking [BR:
spo04131
]
Autophagy
Other autophagy associated proteins
Others
2540836 (vps38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG14
DUF5053
Motif
Other DBs
NCBI-GeneID:
2540836
NCBI-ProteinID:
NP_595743
PomBase:
SPBC18H10.19
SPBC18H10.19.1
UniProt:
O60149
LinkDB
All DBs
Position
II:join(1806262..1806498,1806729..1806899,1806964..1807980)
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AA seq
474 aa
AA seq
DB search
MSLELPGNYRLSRLKSIQIRNVQEIQNHSKFAINTTENLWKRDVQLKRAISEGTIRIFIS
LHVQSKKLPVYITETSGNANHIFYVDEKVTEKLQKYRHEEYFIVRTWCSSSSHAFKLHKE
WKILRYDSNFRYIGNDPVFAVCHIRNGLLCEFNDGVYIYTTSQSSDIMRQTSFPKSASTY
SIDRRKDGYTIQKITRILKLAECIDEMHIAKHEIRAHFQEEEFQQIRLMHKRMLLRDEKI
DELAKLEHLWQKQINSITQMRTKFDKTKSWLSSKRNTLNKSKESLQKDEAEYVELANSLK
TKVETNIEIRILMAHAIRMHVSHLSKIYPIQPSPGNHDEFTIRNLRLSFEPDKINNVEMA
ASIGFLAHLLQTLSKYLEKELAYPILCASSRSSILDTLTPDIPTRIFPLYPATRPIELFE
HAIYLLNQDVNDFLETFGLPIDQSMDILRNFKKLLQFILSGQHLSFVQVTSTAP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttgaattaccaggaaactaccgactttccaggcttaaatcaatacaaataaga
aatgttcaagaaattcaaaatcatagcaaatttgcgatcaatacgacggaaaatttgtgg
aaacgagatgtgcagttaaaacgtgcaatttccgaaggaactattcgtatttttatatca
ttgcatgtgcagagtaagaaattgcctgtttatattactgaaacgagcggaaatgctaat
cacatcttttacgtcgatgaaaaagtaaccgaaaagcttcaaaaataccgtcacgaagag
tactttatcgtgaggacttggtgctcatcaagtagtcatgccttcaagctacataaagaa
tggaaaattttgagatatgacagtaattttcgttatattggtaatgatcctgtttttgca
gtttgtcatattcgaaacggtcttttatgtgaatttaatgatggcgtttacatctacaca
acatcccagtcttcggatattatgagacagacctcctttccaaaaagtgcctccacatat
tctatagacaggcggaaggatggttacactattcagaaaatcactcgaattttgaaactg
gctgaatgcatagatgaaatgcacattgctaaacatgaaattcgagctcattttcaggag
gaggagtttcagcagatacgtttgatgcacaaaaggatgttacttcgggatgaaaaaatc
gatgaactggctaaattagaacatctttggcaaaaacaaattaatagcatcactcagatg
aggacgaaatttgacaagacgaaaagctggttatcctcaaaaaggaacactttgaacaaa
tccaaagaatcccttcaaaaagatgaagctgagtatgtggaacttgccaattctttaaaa
acaaaagtagagaccaatatagagattcgaatccttatggcacatgctattcgtatgcac
gtttcccatctttccaaaatttacccaatccaaccatcgcctggcaatcatgacgagttt
acaattcgcaatctccgcctatcttttgagccagataaaattaataatgtggaaatggct
gcttccataggatttttggcgcatttacttcaaactctttcaaagtatctcgaaaaagaa
ctcgcttatccaattctttgcgcatcttcgagatcctccatcctggatacattgacaccc
gacatccccacgcgtatctttcccctttatccagcaactcgaccaattgagctttttgaa
catgccatttatcttctcaaccaggatgtaaatgattttttagaaacttttggattacct
attgaccaatccatggacatactcaggaactttaaaaaactgctccaatttattttatca
ggacaacatctatcttttgtacaagtaacgtctaccgctccttaa
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