Schizosaccharomyces pombe (fission yeast): 2540858
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Entry
2540858 CDS
T00076
Symbol
utp15, SPOM_SPBC428.19C
Name
(RefSeq) U3 snoRNP protein Utp15
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
2540858 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2540858 (utp15)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
2540858 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_Vps41
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_LRRK2
WDR54
Beta-prop_WDR11_2nd
WD_LRWD1
PALB2_WD40
Utp8_C
Motif
Other DBs
NCBI-GeneID:
2540858
NCBI-ProteinID:
NP_595197
PomBase:
SPBC428.19c
SPBC428.19c.1
UniProt:
O94365
LinkDB
All DBs
Position
II:complement(join(479203..480369,480579..480896))
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AA seq
494 aa
AA seq
DB search
MSAPAGRLQPQRFAALPNPVTAENKFWRSFKVPVVAKEYSAITSIHFSAESPYDFAVTSG
ARVQIYGASSRSVKKTIARFKDTAYSGNIRKDGKLLLAGDATGLVQIFDLSTRSILRALD
AHQFPVHVTQFCPYANTTFLSGSDDKTVKVWDLSTGAVQYDLSGHEDYVRTASWMSATRL
VSGGYDGTIRLWDTRIADPEVMSFSHGEAIDVVLPMQSGSTVISAGGPSIKVWDLVAGRQ
TPTKKLSNHQKSITCLAMNSENTRLLSGGLDGHVKIYNISDWKVVHGMKYSGPILSMGLS
PDSCNLVVGMSNGTLSQRTRRITKQTSSKTPFLGGVGSAFGVVGKKKQIYKGENDEFYVE
EARRKRLRPFDKALKSFCYSDALDMVLENGSPVLIITMLIELLHVGGLRIALSNRDDLSL
TPLINFLRKYIRDPRFSETLCIVTSTILDIYGAALGGSVMVENAISKLREKVEQEVAVTQ
RANELVGMLQMLSA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcctgctggtagacttcaacctcagcgttttgctgctttacctaatcccgtt
actgctgaaaataaattttggcggtcattcaaggttcctgtcgttgccaaggaatatagt
gctatcactagtattcatttttccgctgaatccccttatgactttgcagtaactagtggg
gctcgtgtacaaatttatggagctagttcaaggtctgttaaaaaaacaattgctcgattt
aaggataccgcatattctggtaacattagaaaggatggaaaacttttgcttgcaggagat
gctacaggacttgtacagatatttgatttgtcaactcggagtattttgcgtgctttagac
gctcatcagtttccagttcatgttacacaattttgtccttatgccaataccacgtttctc
tctggatccgatgacaaaactgtaaaggtctgggacttgtcaactggtgccgttcagtat
gatctttctggacatgaagattatgttcgtactgcttcatggatgagtgctactagactt
gtgagtggtggatatgatggtacaattcgtttatgggatactcgaattgcggacccagaa
gtaatgtctttttcgcatggtgaagcgattgacgttgtgcttccaatgcaatctggtagc
actgttatttcagctggtggaccatccattaaagtttgggatttagtggctggaagacaa
acacctacgaagaagctgtctaatcatcaaaagagtatcacatgccttgccatgaactcc
gagaatactagacttttgagtggtggtttagacggacatgtgaaaatttataacatctcc
gattggaaagttgtccatggcatgaaatattctggccctattttatctatgggactttct
ccggatagctgcaatttagttgtgggtatgtcgaacggtacattatcgcaacggactcga
cgtataaccaagcaaacgagctcaaaaactcctttcttagggggcgtcggaagtgctttt
ggtgtagtaggtaaaaagaaacaaatctataagggcgagaacgatgaattttatgtcgaa
gaggctagacgtaaaagacttcgtcctttcgacaaagctttaaaatcattttgttactct
gatgctttggatatggtattggagaacggatcacctgttcttatcataactatgcttatt
gagcttcttcatgttggagggttacggattgcattgtctaacagagatgatttatctctt
actcctttgataaacttcttaagaaaatatataagagaccctcgtttctccgaaacttta
tgtatagttactagcaccattttagatatatacggagctgctcttgggggcagcgtaatg
gtggaaaatgcaatttcaaagcttcgtgaaaaagttgagcaggaagtagcggttactcaa
agggcaaatgagttggttggtatgcttcagatgttgtctgcttga
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