Schizosaccharomyces pombe (fission yeast): 2540971
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Entry
2540971 CDS
T00076
Symbol
dip2, SPOM_SPBC3D6.12
Name
(RefSeq) U3 snoRNA associated protein Dip2
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
2540971 (dip2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2540971 (dip2)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
2540971 (dip2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Utp12
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ASA1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
DSE1_N
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_Aladin
NBCH_WD40
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR54
Ge1_WD40
PAC11
PROPPIN
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Beta-prop_MIP2
Motif
Other DBs
NCBI-GeneID:
2540971
NCBI-ProteinID:
NP_595524
PomBase:
SPBC3D6.12
SPBC3D6.12.1
UniProt:
P87177
LinkDB
All DBs
Position
II:1290564..1293332
Genome browser
AA seq
922 aa
AA seq
DB search
MVKSYTRYEPTEFFGVIASSGCNILGQPSSSAKSVGRAIVGGLESVLEWDLKTGQLLSKW
KDSDCSAKVTCIANFDEMYAVGYADGSIRLWKDGELLITLNGHKSAVTTMDFDKMGTRLA
SGSMDTDIIVWDIVAETGLFRLRGHKDQITKLLFITPPSKNTAEETVVDTDIDSGDMDVD
SKSSDSFLLSVGKDSFMKLWDLSIQHCVETHVDHQGEIWAMCVSPDAKRCLTAGTGSDVK
VWEISFPDDNNFTPTTKAFQQLGTFTRQSRDRPITLAYDVSNRYVVFQAHDRLLEVFRLR
SSAELEKILNRRRRRKKSEDVSITLKDEYEPFALIRTTARASSVAWIPGNRTPTLVTSLQ
NNSIEVYALDVKSEGSAAPLTERASRISAIEIPGHRADVRTLALSANHDVILSGANGSLK
LWNKKTTSCIRTIECGYVLAASFINNDKCIVSAYKSGELEVYDIASSSLIERIQAHDGAI
WDLAVGHDGTYFATASADHTVKLWSLKSSFDFVPGTTRKVTTLKLEQTRQIDFTDDVLAV
KISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSADKNV
KIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFFTCSKDREVRYWDGKSFDLILKLRGHH
SEVWALAVGPTFVVSGSHDHSIRLWEQGDDLVFLEEERERELEEQYESTLVSSYENAEAD
GEVKDGDVAAVTKQTIESLKDGEKILEAITIGIEDLDQEIQYRLDLLKSPGKARGPRNPI
LAHLGVSAEEYVLNTFKKIRSSHLDDALLVLPFEHVLSLFRFIDIWASRKWSIPLVSRII
FFLLRTYHRQLTTTVKMRPLLNNIRSSLRGSLQEERSLIGYNAAGLSYLRHEWELTHNTS
LEDIDSTSLEVDGKKRAFSNIV
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaagctatacgcggtacgaaccaaccgaattttttggtgtcattgcgtcttcg
ggatgtaatattctcggtcaaccctcttcgtctgctaaatctgtaggcagagccattgtt
ggcggtcttgagtctgttttggaatgggatttaaagactgggcaattactatcaaaatgg
aaggattctgattgttcggcaaaagttacttgtattgcaaactttgatgaaatgtacgct
gtgggctatgcagatggttctatacgtctttggaaagatggagagctcttaataactctt
aatggtcataaaagtgctgttactaccatggattttgataaaatgggcacaagattggcc
agtggaagcatggataccgacattattgtatgggatattgtagctgaaaccggcttgttt
agactacgtggacacaaggaccaaattaccaagcttttgttcattacacctccttcgaag
aatacagctgaagaaacagtggtggacacagatattgattccggcgacatggacgttgac
agtaaatcgtctgattcgtttcttttgtctgttggcaaagattcttttatgaagctttgg
gatttgtctattcagcattgcgttgagactcatgtcgaccaccaaggcgaaatttgggct
atgtgtgtttcaccagacgccaaacggtgcctcactgctggtaccggttctgatgttaaa
gtttgggaaatcagttttccagatgacaataatttcactccaactactaaagcatttcag
caattaggtacctttacccgtcaaagccgtgaccgtcccatcaccttggcttacgacgtt
tcaaaccgttatgttgtattccaagctcatgaccgtcttctggaggtttttcgccttcga
tcaagtgcggagctcgaaaagattctgaatcgacgacgccgtcgtaaaaagtctgaggac
gtttcgatcacgttaaaagacgaatatgaaccttttgctctaattcgaaccactgctcgt
gcttcgtctgtagcttggataccaggaaatcgtacacctacgttggtaacatctcttcaa
aataactcaattgaagtttacgctttggatgtcaaatctgaaggttctgctgcaccatta
actgaacgggcttcgcgtataagtgccattgaaattcctggtcatcgtgctgacgttcgt
accttggctttgtccgctaatcacgatgtgattttaagcggtgctaacggctctttgaag
ctttggaacaagaaaaccacatcttgtatccgtacaatcgaatgtggttatgtacttgct
gctagctttataaataacgacaagtgtatcgtatccgcttacaaatcaggagaacttgaa
gtctatgacattgctagctcttctcttatcgaacgtatccaagctcacgatggcgcgatt
tgggatttagcggttggtcacgatggcacttacttcgcgactgcctctgccgatcacaca
gtcaaactctggtctctaaaatcgtcttttgatttcgtaccaggtaccactagaaaagtc
accacgttgaaattagagcaaacacgacaaatagatttcacagacgatgtccttgcggtt
aaaatttcacctgatggtcgtttcgttgctgcttcactattagataataccgtcaaggta
tactatttggattcgttgaaattctttttaaatctttatggtcataagcttccagttctc
tctatggatatttcttatgactcaaagttgctggttacttgcagtgccgacaagaatgtc
aaaatatggggtcttgattttggcgattgccacaagtctatatttgcacatcaagattct
attatggaagtcacatttcaaccagatacttacaacttttttacttgttcaaaagatcga
gaagttcgttattgggacggtaaatcatttgatctaattttaaaacttcgcggtcatcac
tctgaagtctgggcattagctgttggtccaacttttgttgtttctggctcccatgaccat
tcaatacgtttatgggaacaaggtgacgatttggtatttctagaagaagaacgggaacgt
gagcttgaggagcaatatgagtcaacgcttgtttcatcttatgaaaatgctgaagccgac
ggagaggttaaagacggagacgtggcagctgtcacgaagcaaacaattgaaagcttaaaa
gacggagaaaagatcttagaagctattacaataggtatagaggatttggatcaagaaatt
cagtacagacttgatctgcttaagagccctggtaaagcccgtggaccgagaaatccgata
ttagcccatttaggtgtttcagctgaggagtacgttttgaatactttcaaaaaaattcgt
agtagccacttagatgacgctcttctcgtgcttccttttgagcacgtcttatcccttttt
cgatttattgatatttgggctagtagaaaatggtcaattcctctcgtttctcgtataatc
ttttttttactcagaacgtatcaccgacagttgacaactacagttaaaatgcgtccatta
ctaaacaatattcgtagtagtttgagggggtcactacaggaggagcgttctctcatcggc
tacaatgctgctggtctttcttatttaagacatgaatgggagcttactcataatacttca
ttagaagatattgatagtacttccttagaagtggatggaaagaaacgagccttttccaac
attgtttaa
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