Schizosaccharomyces pombe (fission yeast): 2540981
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Entry
2540981 CDS
T00076
Symbol
vps36, SPOM_SPBC3B9.09
Name
(RefSeq) ESCRT II complex subunit Vps36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
2540981 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2540981 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spo04147
]
2540981 (vps36)
Membrane trafficking [BR:
spo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
2540981 (vps36)
Exosome [BR:
spo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
2540981 (vps36)
Exosomal proteins of colorectal cancer cells
2540981 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
Zn_ribbon_RanBP
GRAM
Vps36-NZF-N
PH-GRAM_MTMR6-like
DZR
Motif
Other DBs
NCBI-GeneID:
2540981
NCBI-ProteinID:
NP_596667
PomBase:
SPBC3B9.09
SPBC3B9.09.1
UniProt:
O43038
LinkDB
All DBs
Position
II:4003312..4004715
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AA seq
467 aa
AA seq
DB search
MAFYLETTPSNLPVLDPSEEILLVQDQVGLYFGDEKSFRHNNGTLYLTKKHIFYVDSVDP
KKNSLKIKISDIRDVQHTSRYFRSSPKIRLSLRHVEKSWACKICTFINVGDPINPCRNCG
VANRFTIIKPKSDARFSQGLCTACTFQNYPDLNTCEICGNQLKNVDRNQLIQLSFRGSGS
SKFYEAIKSETDEIEKQRYSNKYDTKVLRKAILEKSLRMGGIHDLEQSHEMQLAKNGRTL
VHAFQDLDAFFSLAKDTMSLADQFAEKMDGLTGTQQSDKVQQLLNKSNQLGVLRGNHLDN
VPVSANSRLYDIELCKSISEVLRTRLKADTDTVTMTQAWAIYNRSRKANLIPPTRFVKAC
ELIDSMEVGITTSKMNSGLILFQLKTSNHSGKLLSAILEVMNPSTTALKCAMRLHWSIGV
TLERLYQAEMDGYIVRDVYEESGSSLLYWKNEFDELSEELTKWFDES
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggccttttatttagaaacaaccccttctaatctaccggttttggatccttcagaagaa
attttgctagttcaagaccaggtaggtttatacttcggagatgagaaaagttttcgtcat
aataatggaacattatatttgacaaaaaaacacatcttctacgtagattcagtagatcct
aaaaagaattcattaaaaattaaaatctccgatataagagatgtacagcatacctctagg
tattttcgctcctccccaaaaattcgcctttctctgcgacatgtggaaaagtcatgggct
tgcaaaatttgtacatttatcaatgtgggtgatcccattaatccttgtagaaactgtgga
gttgctaaccgatttactattataaagccgaaatcagatgcgcgtttttctcaaggatta
tgcaccgcgtgtacttttcaaaattatccggatctgaatacttgtgaaatttgcggcaat
caattaaaaaatgtcgatagaaaccagcttatacaactctcgtttagaggctcgggttca
tccaagttttacgaagctatcaaatctgaaacagatgaaatagaaaaacaaagatactcg
aataaatatgatactaaagttctgaggaaggccatccttgaaaagtctttgcgaatgggt
ggtattcatgatcttgagcaatctcatgagatgcaattagccaaaaatggacgtacctta
gtacatgcgtttcaagatttagatgcttttttttctttagcgaaagatactatgtctctg
gctgaccaatttgctgaaaagatggatgggctgaccggcactcaacagtctgacaaggta
cagcagcttttaaacaaatcgaatcagttaggagtgttacgaggaaatcatttagataat
gttcctgtttcggctaattctcgattgtatgatattgaactatgtaaaagtatctcagaa
gttttacgcacaaggttaaaagctgataccgatacggttaccatgacccaggcttgggcc
atctataatcggtcaagaaaagcaaacctgattcctccgaccagatttgtgaaggcttgt
gaactaatagattccatggaggttggtataacaacgtccaaaatgaactctgggcttatc
ctttttcaattaaaaacttctaatcattcaggaaaacttttgtccgctatattggaagtt
atgaatcctagcactacggctttgaaatgtgcaatgaggttgcattggtccattggtgta
acgttagaaagactttatcaagctgagatggacggttacattgtacgtgatgtttatgaa
gaatctggttctagcttactatactggaaaaacgaatttgacgaattatcagaagaattg
actaaatggtttgatgaatcatag
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