Schizosaccharomyces pombe (fission yeast): 2540985
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Entry
2540985 CDS
T00076
Symbol
trz2, SPOM_SPBC3D6.03C
Name
(RefSeq) 3'-tRNA-processing endonuclease Trz2
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spo03016
]
2540985 (trz2)
Enzymes [BR:
spo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
2540985 (trz2)
Transfer RNA biogenesis [BR:
spo03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
2540985 (trz2)
Prokaryotic type
2540985 (trz2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-GeneID:
2540985
NCBI-ProteinID:
NP_595514
PomBase:
SPBC3D6.03c
SPBC3D6.03c.1
UniProt:
P87168
LinkDB
All DBs
Position
II:complement(1271978..1274014)
Genome browser
AA seq
678 aa
AA seq
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MKASLLVPRRALLFGQLLPPKYSWYSVKRWQSQLTFRNKSKRNTNRIMLSVVSSLNPDSL
IAPLLCVSLDNRKYLIGSMGELTQMKFRSQASNYGGKSVSVFLMPPSLQSLNAWGITAGL
FGYLQSSGIQNTWGLHAPKPVISIIKKSHHLFSGSPLRLDLNSFSSEDNADATNSFYLDE
PEFCTIKGNIYSNWSFLSFNSKEAAGVFNADKALALGVPFGPSNGKLCAGEAVLSKDGTT
WIYPHQVVGPPRKRQYFYVLGCSSLSALNQMSKHVDSFSDVYPTCIIHILEKGIWGPEYI
KFLSHPKFSRAQHFISCIELASNNPVFQRNKGRNVLPACRDFAAFDIKPSTLDTQTQLPE
NTYVLKEETSMVLYDEQCKISESPSYSPVKLAKKFSSFNPLPFENEGYTLDVLGTSATCP
TWRRSLSSYSVAIDGTVIMLDCGEGAISQFFRQYGTNTEPMLRKLKAIFITHLHSDHYLG
LLNVLQAWNKANTNNSMHINIIGPKFLWQWLQRLKSPANLQALLNRIIFIIAKETVTTPL
QLTSDLSISSVPSIHINDSYSCIISHTKYGKLVYSGDTRPNEKLVKAGIGASLLLHESTF
EDDLKHEAIQRQHSTASEALSVAQSMKAKALILTHFSQRSYDADFLPPDWTIYPKSKTIY
ANDGLQWQQFQSKQRETI
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcttctcttctggttccacggcgggcgctgctattcggtcaattattaccgccc
aaatattcttggtatagtgtcaaaagatggcagagtcaattgacatttcgaaacaaatcc
aaaagaaacacgaatagaattatgctttcggtagtttcttctttgaatcctgatagtctc
atagcccctttactatgcgtttctctcgataatcgaaagtaccttattggaagcatggga
gaactgactcaaatgaagtttcgaagtcaagcgtctaactatggagggaaatctgtcagt
gtatttttaatgccacctagtttacaatccctgaacgcttggggtataactgctggcctt
tttggctacttacaatccagtggtatacaaaacacttggggtttgcatgctcccaaacct
gtaatttcaattattaaaaaatctcatcatcttttttcaggaagtccattacgactcgat
cttaattcattctcaagtgaggataatgccgatgctacgaattctttttacttagatgag
ccggaattttgtacgattaaagggaatatatactccaattggtcttttctttctttcaac
agcaaagaggcagctggagtgtttaatgcggacaaggctttagctctaggagttcctttt
ggcccatcaaacggcaagttatgcgccggtgaagcggtgttgagcaaagatggtactaca
tggatttatcctcatcaagtagtgggtcctcctaggaagcgtcaatacttttatgttctc
ggttgttcgagtctttctgccctcaaccaaatgtcaaaacatgtagactcattctcagac
gtatatcccacttgtataattcatatattagaaaagggtatttgggggccagaatatatc
aaatttttatctcacccaaagttttctcgtgctcaacatttcatctcgtgtatcgaactt
gccagtaataaccctgttttccaaagaaataagggaagaaatgttttgccagcctgccgt
gattttgctgccttcgatataaagccttccactttggatacacagacacaattgcctgaa
aatacttatgtcctgaaggaagaaacatcgatggttctttatgatgagcagtgcaagatt
tcagagagtccttcgtatagtccggtgaagctggctaaaaaatttagctcgtttaatcct
ttaccctttgaaaatgaaggatacacgctggatgtcttaggaactagtgccacctgtcct
acttggcgtagaagcttaagttcttactcagtcgcaatcgatggaacagtcatcatgctg
gactgcggcgagggagccatatcccaattttttcgccaatatggaacaaatactgagcca
atgcttcggaaactaaaagcaatctttattacgcacttacattccgatcattatcttgga
ttattgaatgtattgcaagcttggaacaaagcaaatactaataacagtatgcatataaac
attattggtcccaaattcttgtggcagtggttacagcgcttaaaaagtccagcaaatttg
caagcattgttgaaccgtataatattcattattgctaaagaaacggttaccactccttta
cagttaacttccgatctctcaatttcttctgtaccatctattcacataaatgattcatat
tcctgtattatatcgcacaccaaatacggaaaacttgtgtacagtggtgacactcgaccc
aatgaaaaacttgtcaaagcaggtataggtgcttctttactccttcatgaatcgactttt
gaggatgatttgaaacatgaagctattcagcgacagcactcgactgcatccgaagcgctt
tcagtcgctcaatcaatgaaagccaaagcacttattttgacacatttcagtcaacgctct
tatgatgctgactttttacccccggattggaccatatatccaaaatcaaagaccatatac
gctaatgacggccttcagtggcaacagttccaaagcaagcagcgagaaacgatatag
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