Schizosaccharomyces pombe (fission yeast): 2541089
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Entry
2541089 CDS
T00076
Symbol
int6, SPOM_SPBC646.09C
Name
(RefSeq) translation initiation factor
KO
K03250
translation initiation factor 3 subunit E
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
spo03012
]
2541089 (int6)
03051 Proteasome [BR:
spo03051
]
2541089 (int6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spo04147
]
2541089 (int6)
Translation factors [BR:
spo03012
]
Eukaryotic type
Initiation factors
eIF-3
2541089 (int6)
Proteasome [BR:
spo03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
2541089 (int6)
Exosome [BR:
spo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
2541089 (int6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_N
EIF3E_C
PCI
BAR_3_WASP_bdg
Motif
Other DBs
NCBI-GeneID:
2541089
NCBI-ProteinID:
NP_595367
PomBase:
SPBC646.09c
SPBC646.09c.1
UniProt:
O94513
LinkDB
All DBs
Position
II:complement(join(938700..940171,940228..940261))
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AA seq
501 aa
AA seq
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MGSELKSTSPLAVKYDLSQKIMQHLDRHLIFPLLEFLSLRQTHDPKELLQAKYDLLKDTN
MTDYVANLWTNLHGGHTDEDMANAFAEKRRSVLQELSELEEEVQGILGVLENPDLIAALR
QDKGQNLQHLQEHYNITPERIAVLYKFAQFQYNCGNYGGASDLLYHFRAFSKDPELNASA
TWGKFASEILTVDWDGAMEELGKLREMVDSKSFKDSAVQLRNRTWLLHWSLFPLFNHANG
CDTLCDLFFYTPYLNTIQTSCPWLLRYLTVAVVTNQNNANQKPRNPRQSYQRRMRDLVRI
ISQENYEYSDPVTSFISALYTEVDFEKAQHCLRECEEVLKTDFFLVSLCDHFLEGARKLL
AEAYCRIHSVISVDVLANKLEMDSAQLIQLVENRNNPSVAAASNVAADQSTEDESIESTS
TNVVADDLITEAETATEAEEPEPEVQFGFKAKLDGESIIIEHPTYSAFQQIIDRTKSLSF
ESQNLEQSLAKSISELKHATV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggatccgagcttaagagtacaagccctttagcggtcaagtatgatttgtcgcaaaaa
attatgcaacaccttgaccgccatctcatttttcctctattggaatttttatctttaaga
cagactcatgatccaaaggagcttttacaagctaagtatgatttgcttaaagataccaat
atgactgattatgtggccaacttgtggactaatcttcatgggggtcataccgacgaggac
atggcaaatgcttttgctgaaaagcgacgcagtgttttgcaagagctctctgaacttgaa
gaagaggttcaaggaattttaggtgtcttagaaaatcctgacttgattgcagctcttcgt
caagataaaggtcaaaatttacaacacctacaagaacattacaacattacccctgaacgt
atagctgttctttacaagtttgctcaatttcaatataattgtggaaactacggtggtgca
tcagatttactttatcattttcgtgccttcagtaaagaccctgaattaaacgcctccgcg
acctggggtaaatttgcttctgaaattttgactgttgattgggatggggctatggaggaa
ttgggaaaacttcgcgaaatggtggactccaaaagctttaaagattctgctgttcaattg
agaaatcgaacttggctcctccactggtccttgtttcctttgtttaatcatgcaaatggt
tgtgatactctttgtgatttgttcttctatactccttatctcaacaccatccaaacctct
tgtccctggctattaagatatttgactgtcgctgttgttactaaccaaaataatgcaaat
caaaaacctcgtaaccctaggcaatcttatcaaagaaggatgcgagatctcgtacgcatc
attagccaagaaaactatgaatacagcgatcctgtgacctcttttatttctgctttgtat
actgaggtcgactttgaaaaagctcagcattgcctcagagaatgtgaagaggttttgaaa
accgacttttttctcgtatctttgtgcgatcactttttggaaggtgctcgcaaattactt
gctgaggcatattgccgtattcacagtgtcataagtgttgatgtgcttgctaacaagctg
gaaatggacagtgctcaattaatacaacttgttgaaaaccgtaataatccttcagttgcc
gcagcttctaatgtagctgccgatcaaagtactgaagatgaaagtattgaatctacctct
acaaatgttgttgctgatgatttaatcacggaagccgaaactgctactgaagccgaagag
cccgaacccgaggtacaatttgggtttaaagctaagttggacggtgaatcaataataatt
gaacaccctacttattcagctttccaacagattatagaccgtacaaagtcattaagtttt
gaaagtcaaaacttggagcaatctcttgctaaaagcatttcggagttaaagcatgctact
gtttag
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