Schizosaccharomyces pombe (fission yeast): 2541094
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Entry
2541094 CDS
T00076
Symbol
rpc1, SPOM_SPBC651.08C
Name
(RefSeq) DNA-directed RNA polymerase III complex large subunit Rpc1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
2541094 (rpc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2541094 (rpc1)
Enzymes [BR:
spo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
2541094 (rpc1)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
2541094 (rpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
2541094
NCBI-ProteinID:
NP_595506
PomBase:
SPBC651.08c
SPBC651.08c.1
UniProt:
O94666
LinkDB
All DBs
Position
II:complement(join(1250083..1254276,1254327..1254350))
Genome browser
AA seq
1405 aa
AA seq
DB search
MKDPIDDQIPKRIKHLQFGINGPEEFVKDGTVEVSRRDLYTMTDRSPAEHGALDLHMGTS
NKQINCATCGESMADCMGHFGYVKLALPVFHIGYFKATLTILQNICKDCSSVLLSDQEKR
QFLKDLRRPGIDNLRRSQICKRINDHCKKMRRCSKCDAMQGVVKKAGPLKIIHERFRYVR
KSQDDEENFRHSFDEALKTIPELKMHLSKAHDDLNPLKVLNLFKQITPVDCELLGMDPEH
GRPENLLWRYVPAPPVCIRPSVAQEGATTEDDLTVKITEIIWTSSLIRAALSKGTPISNL
MEQWEFMQLSIAMYINSEMPGLRPSDMPSKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGR
TVISPDPNLRIDQVAVPYRIAKILTFPERVTTQNKKHLQDCIRNGPDVHPGANYVIDRES
GFKRFLRFGNRNRIADDLKIGDIVERHLHDNDVVLFNRQPSLHKLSIMAHLVKVRPWRTL
RFNECVCGPYNADFDGDEMNLHVPQTEEAKTEALELMGIKNNLVSPRNGEPIIAATQDFI
TAAYLLSLKDTFLDRKSISNICCYMMDASTHIDLPPPAIIKPRCLWTGKQVFTVLMKPNR
FSKVLVNLDAKTRSFSRIKSKTPEMCPKDGYLMIRNSEIIAGVVDKSVVGDGKKDSLFYV
ILRDYGALEAAEAITRLSKMCARFLGNRGFSIGIEDVQPGKSLSSQKEILVNKAYATSDD
FIMQYAKGILECQPGMDQEATLEAKISSTLSKVRDDVGEICMDELGPANSPLIMATCGSK
GSKINVSQMVACVGQQIISGKRVPDGFQDRSLPHFHKNSKHPLAKGFVSNSFYSGLTPTE
FLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSSAYDGTVRSSNSDVVQFVYGDDG
LDPTYMEGDGQAVEFKRTWIHSVNLNYDRHDSAMLPYEIIDYVNRALDDPKFLTNCNRDF
IETIRTFVIENIAKYLASVRERRDLAPMLEEPDMDDLDDMEGDEFAPVAKRKSVENIIRV
TEKQLRSFVDRCWEKYMRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVAAQTTLGV
PRIKEIINAAKTISTPIITGQLINDRDERSARVVKGRIEKTYLKDVTSYIEEVYGPVTTY
LSIQVNFDTISKLQLDITLADIAAAIWNTPKLKIPSQQVTVNNTLQQIHVHTSSDGKSSE
TEVYYRLQTYKRVLPDVVVAGIPTINRSVINQESGKIELFMEGTGLQAVMNTEGIVGTKT
STNHVMEMKDVLGIEAARYSIISEIGYTMAKHGLTVDPRHIMLLGDVMTCKGEVLGITRF
GVAKMKDSVLALASFEKTTDHLFNAAARFAKDSIEGISECIVLGKLAPIGTNVFQLIRRT
EEEEEQKPKELLFDTPSLHQLEITA
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcctattgatgatcagattcctaagaggataaagcatcttcagtttggaatt
aatggtccagaagaatttgttaaagatggaaccgtagaagtttctaggagagatctgtat
acgatgacagaccgatcaccagcagaacatggtgctttagatttacatatgggtaccagc
aataagcaaattaattgtgctacttgtggtgaatcaatggctgattgtatgggtcatttt
ggttatgttaagcttgctttacccgtttttcacataggatacttcaaggctacgttgacc
attttacaaaatatatgtaaggattgttcttcagttcttctatcagaccaagaaaaacgc
caatttttgaaggacttgagacgtcctggcattgataatctgcgtcggtcacagatatgt
aagagaattaatgatcattgcaaaaaaatgcgccgctgttctaaatgcgacgcaatgcaa
ggtgtggtaaaaaaggctggtcctttgaaaataattcacgaaagatttcggtatgttcgc
aaatcacaagatgacgaggaaaattttcgacactcgttcgatgaagctttgaaaactata
cccgaactgaaaatgcatctctcaaaagcccatgatgatttaaatcctttaaaggtttta
aatcttttcaaacaaattactccagttgattgtgagctactgggaatggatcctgaacat
ggtcgtccagaaaatttactttggcgttacgttcctgctcctcctgtttgcatccgtcct
tcggtagcccaagagggtgctaccactgaagatgatttaaccgtaaaaatcactgaaatt
atttggactagttcgctaattcgtgccgccttaagtaaaggcactcctattagtaattta
atggaacaatgggaatttatgcaactatccattgcaatgtatattaatagtgagatgcca
ggtctccgtccttctgacatgccctcaaagcccattcgggggttttgtcaacgtcttaag
ggtaaacagggtagatttcgtggtaatttgtcgggaaagcgtgtagacttttccggcaga
acagttattagcccggatcctaatttacgaattgatcaagttgccgttccatatcgcatt
gctaaaattttgacatttcccgaaagagtcacaactcaaaacaagaagcacttacaggat
tgcatcagaaatgggcccgatgtgcatccaggtgcaaactatgttatagatcgagaaagc
gggtttaagcgctttttgaggtttggcaatagaaaccgtattgctgatgatttgaaaatt
ggtgatatcgttgagcgtcatctacatgataacgatgtagttttgttcaatcgtcaacct
tcactccataagttatcaatcatggctcacttggtaaaggtacgaccatggcgtacctta
agatttaatgaatgtgtatgcggtccctacaatgccgattttgatggcgatgaaatgaat
ttacatgttcctcaaactgaggaggcaaagacagaagccttggagttgatgggcattaaa
aacaatcttgtaagtcccagaaacggtgagcccattattgcagcaactcaagatttcatt
acagctgcctatttgctttctttaaaagatacgtttttagatcgtaaaagtatctcgaat
atatgttgttatatgatggatgcttcgactcatattgatttacctccacctgccattatt
aaacctcgctgtttatggactggaaaacaagtgtttacagtattgatgaaacctaataga
tttagcaaagttttggtaaatctggatgctaaaactcgatccttctctcgaattaagtca
aagacccctgagatgtgtcccaaagatggatatttaatgattagaaatagcgaaattata
gctggtgttgttgataaatcagttgttggcgatggcaagaaggattcactattttatgtg
attttgcgggattatggagcactagaggcagccgaggcaatcactaggctttccaaaatg
tgtgctagatttttaggtaatcgaggattttccataggtattgaggatgttcaacctggc
aaaagtctttcttctcaaaaagaaatattggtcaacaaagcctatgctacttctgatgat
ttcattatgcagtatgcaaagggaatccttgaatgccaaccaggaatggatcaggaggcc
acgcttgaagcaaaaatttcctcgacactttccaaagttcgtgacgatgtcggagaaatt
tgtatggatgaattgggtcctgctaattcacctctgattatggctacctgtggttccaag
ggttcaaagattaacgtttctcaaatggttgcttgtgtcggtcaacagattattagtggt
aaacgtgttccagatggtttccaagatagatcacttcctcatttccataagaattcaaag
catccgttagctaaaggatttgtaagtaatagtttttacagtggattgacacctactgag
tttctatttcacgctatctctgggcgagaaggtctcgtagatactgcagtcaaaaccgcc
gaaactggttacatgtcacgtcgattaatgaaatcgttggaggatttatcttctgcgtac
gatggtactgttcgaagctcaaatagtgatgttgtacagtttgtttatggtgatgatggg
ttggatccaacgtatatggagggagatggtcaagctgtcgaatttaaacgtacgtggatc
cactctgtcaatttgaattacgatagacacgactctgcgatgttgccatatgaaattata
gattatgttaatcgggcccttgatgatccaaagtttctgaccaattgcaacagagatttt
attgaaactatacgtacatttgttatagaaaatatcgcaaagtatttggcttctgttcgt
gagcgtcgtgacctcgcccccatgcttgaagaaccagacatggatgacctggatgacatg
gaaggggatgaatttgcacccgttgcgaaaagaaaatctgttgagaacattatcagggtg
actgagaagcagctacgctcatttgtagaccgttgttgggaaaagtatatgcgtgccaag
gtagagcctggtacggctgttggtgccattggtgctcagtccattggtgagcctggtact
cagatgactcttaaaactttccattttgctggtgttgctgcccaaactactctaggtgta
cctcgcatcaaagaaattattaacgctgccaaaacaattagtactcccattatcaccgga
cagcttatcaatgatcgtgacgaaagatctgcacgtgtcgttaaaggtcgtattgagaag
acatacctgaaagacgttactagttatattgaggaagtttatggtccggtcactacttac
ttatctatacaagtaaattttgatactatttcgaagttgcagctagatattacattagct
gatattgccgcagcaatttggaatactccaaaacttaagattccatctcaacaagtcact
gttaacaacacacttcagcagattcacgttcacacctcttccgatgggaagagtagcgaa
acagaagtttattacagattgcaaacgtataagcgcgttttaccagatgttgtagttgct
ggaataccgaccattaatcgttcggttatcaatcaagaatccggtaaaattgagctcttc
atggaaggtaccggtttacaggctgtaatgaatacagaagggattgtgggaacgaaaact
agtactaatcatgtaatggaaatgaaggatgtcctaggtattgaagccgcccgttactcc
attatctctgagattgggtatacgatggccaaacatggtcttacagttgatcctcgacac
attatgcttcttggtgatgtgatgacatgtaaaggtgaggttttgggaattacgaggttt
ggtgtcgcaaagatgaaagatagtgttttagcacttgcatcgtttgaaaagactacggac
catttgtttaatgctgctgcgaggtttgcaaaagattctatcgaaggcataagtgaatgc
attgtcctcggtaaactggctcctattggcacgaatgtctttcagcttattagaagaaca
gaagaagaagaagagcaaaaaccgaaagaactattgtttgatactccatctcttcatcaa
ttggaaattacggcttaa
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