Schizosaccharomyces pombe (fission yeast): 2541123
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Entry
2541123 CDS
T00076
Symbol
prf1, SPOM_SPBC651.09C
Name
(RefSeq) RNA polymerase II-associated Paf1 complex protein
KO
K15178
RNA polymerase-associated protein RTF1
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2541123 (prf1)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
2541123 (prf1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
2541123
NCBI-ProteinID:
NP_595507
PomBase:
SPBC651.09c
SPBC651.09c.1
UniProt:
O94667
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Position
II:complement(join(1255607..1257026,1257074..1257247,1257298..1257386))
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AA seq
560 aa
AA seq
DB search
MADFQDELLALAGIDDSDVASNRKRAHDDLDDVLSSSSDEDNNENVGQDYAEESGGEGNE
KSEDEFEEKFKNPYRLEGKFKDEADRAKIMAMTEIERESILFEREEEISKLMERRELAIR
LHQQNAQYMAQSTRRSTRDKPLTSAAAGKRDKLTELKKRRQERSARSVSERTRKRSPVSD
YEEQNESEKSEEEEGYSPSYAEEKVEQVSKDNASANLYDLNAIRLGRKHVAEYMYHPIFE
STVTGCFVRVKIGERDGQGVYRLCQVKGILESRKPYRVDGVLTKVSLECFHGRSKRVFDV
NVLSNEPFSDHDFQRWHHQMMEDKLSMPSKNFVQRKLNDLRDMSKYVLSEKEVSDIINRK
KELSRVPSNIAAEKTRLRQRRQAAYVAGNAELVKEIDDQLNTLEELSMGSNQNSNSAMDQ
LAKVNERNRRRNHTEIRLAEQRMNEERRRLSAAATATPMSAPTSVLTGTSPQPSPSLSTS
IMSTPKLNPSESVVVASEKASSPDLSPKLLPSESQIFDEGIAVTQTPNTLEDKDFKLHEK
AVHGIDDIIATVDFGIDINI
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggccgactttcaggatgaattgttggcattagctggtattgatgactcagatgttgct
tcaaaccgtaaaagggctcatgatgatttagatgatgtgttgagcagcagttcagacgaa
gacaataatgaaaatgttggacaggattatgcggaagagtctggaggagaaggaaatgag
aagtcggaagacgaatttgaagaaaaattcaaaaacccgtatcgtctagagggcaagttt
aaagatgaagcagacagagcaaagataatggcaatgacggaaattgagagagagagtatt
ctcttcgaacgtgaagaagaaatttcaaagttgatggaaaggcgtgaattggcaattcgc
ctccatcagcaaaatgctcagtatatggcgcaatctactagaaggtctactcgtgacaag
cctttaacttcagcagccgctggcaaacgtgataagcttactgagctgaaaaagcgccgc
caggaacgttcagctagaagcgtctctgaaagaactagaaaaaggagccctgtttccgat
tatgaagaacagaatgagtcggagaagagcgaagaagaggaaggttactctcccagctat
gctgaggaaaaagttgaacaagtttcaaaagataatgcatccgccaatttgtacgattta
aatgcaattcgtcttgggcgtaaacatgtcgcggagtacatgtatcatcctatctttgag
tccaccgtcactggatgctttgttcgggttaaaattggtgagcgtgatggacaaggtgta
tatcgcttatgtcaagtcaagggtattttagaaagcagaaagccgtatcgtgttgatggt
gttttaactaaagtttcactggaatgttttcatggtcgctcgaaaagagtgttcgatgtc
aacgtcttatcaaatgagcctttttccgaccatgatttccaacgatggcatcaccaaatg
atggaagataagctttccatgccctctaaaaattttgtacaacgaaagctgaatgacctc
agggatatgagtaaatacgttttaagcgaaaaggaggtttctgatattattaacaggaag
aaagagttatcgcgtgttccttcgaacatcgctgctgaaaagacccgtcttcgtcaaagg
agacaagctgcttatgttgctggtaatgcagaattggtcaaggagattgacgatcaatta
aacactttggaagaactttccatgggatctaaccaaaatagtaattctgccatggatcaa
cttgccaaagtgaatgaacgtaatcgacgccgcaaccataccgaaattcgcctggcagag
cagcgtatgaatgaagaacgaagacgcctctcagcagcggctactgccacaccaatgtct
gcacctacttccgtactgacgggaacaagtcctcaaccttcaccttccctttctacctcc
attatgtctaccccaaagctgaaccccagtgaatcagtcgtcgttgcctctgaaaaggca
tcatctcctgacctgagtcctaagctattaccttctgaatcccaaatttttgacgaaggc
attgcagtgactcaaaccccgaacacgttggaggacaaagatttcaaacttcacgaaaaa
gctgttcacggaattgatgatattattgctactgtggattttggcattgatatcaacatt
taa
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