Schizosaccharomyces pombe (fission yeast): 2541126
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Entry
2541126 CDS
T00076
Symbol
nog1, SPOM_SPBC651.01C
Name
(RefSeq) GTP-binding protein Nog1
KO
K06943
nucleolar GTP-binding protein
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
2541126 (nog1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2541126 (nog1)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
Pre-60S particles
GTPases
2541126 (nog1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOG1_N
NOG1
NOGCT
MMR_HSR1
FeoB_N
GTP_EFTU
AIG1
DUF5965
DUF3736
MMR_HSR1_Xtn
PPV_E1_C
AAA_16
Motif
Other DBs
NCBI-GeneID:
2541126
NCBI-ProteinID:
NP_001342776
PomBase:
SPBC651.01c
SPBC651.01c.1
LinkDB
All DBs
Position
II:complement(join(1236884..1238600,1238821..1238915,1239005..1239100,1239156..1239176))
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AA seq
642 aa
AA seq
DB search
MATAVFKNITPIPDVNTFLDVVLSRTQRKTPTVIRSGFKISRIRGFYGRKVKFTQDTITE
KLDSILQEFPKLNDIHPFHADLLNILYDRDHLKIALSQLSTAKHLVENVARDYIRLLKYG
DSLYRCKQLKRAALGRMATIIKRQKSSLEFLEQVRQHLSRLPAIDPNTRTLLVCGYPNVG
KSSFMNKVTRAQVDVQPYAFTTKSLFVGHFDYKYLRWQVIDTPGILDHPLEQMNTIEMQS
ITAMAHLRSAVLYFMDLSEMCGYSVAAQVKLYHSIKPLFANKVTILVLNKIDAMRPEDLD
QKNQELLQTIIDDGNVKVVQTSCVQDIGVMDVRTTACEALLAARVEQKLKGSRVNNVLNR
IHLAEPAARDEVARPACIPDSVKTRRAYDANDPNRRILARDIEAANGGAGVYNVELRDKY
ILQDPSWKYDRMPELLDGKNVADFVDPEIEAKLLALDEEEERLEREGYYDSDQEIEDADE
EEVLEKASRIREKNKLTMLAARQKKIKNRPVLPRTAGIRTLDELQSSLQSAGLPSDSIEE
RARSRARTAAANEMADGSGVDLLMNEGEEIRSKSIAPRSQSNRRESGVHAEGARSYADRL
ARVKQIHRNRMARASESDRHVIAAKPKHLLSGKRGNGKTQRR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcagtgttcaagaatattactccaattccggatgtgaacacgttcttggac
gtggtcctttctcggactcaaagaaaaacacctaccgttattcgatcagggtttaagatc
tctcgtattagaggtttttatggacgaaaagtaaaatttactcaagatacaattactgaa
aagctggattcgattttacaggaattccctaaacttaacgatattcatccttttcatgct
gaccttttgaacattctttacgatcgcgatcaccttaaaatcgctctttcacagctctcg
acagccaaacatttagtagaaaatgtcgctcgtgattatatccgtttgctcaagtatggt
gatagcttataccgctgcaaacagctcaagcgtgccgctttgggacgcatggcaacgatc
attaaaaggcaaaagtcatccctcgaatttcttgagcaagtcagacagcacttgtctcgt
ttgccagcaattgatccaaatacacgaaccttattggtttgcggctatcccaacgttggt
aaatcctcattcatgaacaaggttactcgtgctcaagttgatgttcagccttatgctttt
accactaaatctctatttgtcggtcattttgattataaatatttgagatggcaagtgatt
gatactcctggtattctggaccaccctttagagcaaatgaacaccattgaaatgcaatct
attactgcaatggctcatcttcgatctgcggttttatatttcatggatctctcggaaatg
tgcggttacagtgttgctgcacaggttaaattatatcatagcattaaacccctttttgcc
aacaaggttactattttggttctcaacaagattgacgccatgaggcctgaggatttggat
caaaaaaatcaagagcttcttcaaaccatcattgacgacggtaatgttaaggtggttcaa
actagctgtgttcaagatatcggtgttatggatgtacgtactaccgcttgtgaagccctt
ttggctgctcgtgtcgaacaaaaacttaagggctcaagggttaacaatgttcttaatcgc
attcatcttgctgagcctgctgctcgtgatgaggttgcacgaccagcttgcattcctgat
tctgttaaaactcgccgtgcatatgatgcaaatgatccaaatcgccgtatacttgctcgt
gatattgaagctgcaaacggaggtgctggtgtctataatgttgaattgcgtgacaagtat
attcttcaagaccctagctggaaatatgaccgtatgcctgaattattggacggtaagaat
gtggctgatttcgttgatcctgaaattgaagcgaagttattagccttggacgaagaagaa
gaacgtcttgagcgtgaaggatattatgattctgaccaagaaattgaggatgccgatgag
gaagaggttcttgaaaaagcaagtagaattcgtgagaaaaacaagctgactatgttggct
gctcgccagaagaaaattaaaaatcgtcctgtacttccccgtaccgctggcattcgtact
ttagacgaactacaatcttccttacaatctgctgggcttccctcagattctattgaagag
cgggcacgctcccgtgcacgtactgcagcagcaaacgaaatggctgatggttcaggtgtt
gacttgttaatgaatgaaggtgaagaaattcgctctaaatctattgccccacgttcacaa
agcaaccgtcgcgaatctggtgttcacgcagaaggtgccagatcttacgctgatcgcctg
gctcgtgtcaaacagatacaccgtaaccgcatggccagggcttctgaaagtgatcgacat
gttattgctgccaagcctaaacatttgcttagcggtaaacgtggtaacggtaaaactcaa
agaaggtag
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