Schizosaccharomyces pombe (fission yeast): 2541213
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Entry
2541213 CDS
T00076
Symbol
pfh1, SPOM_SPBC887.14C
Name
(RefSeq) DNA repair and recombination protein
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
2541213 (pfh1)
03029 Mitochondrial biogenesis [BR:
spo03029
]
2541213 (pfh1)
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
2541213 (pfh1)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
2541213 (pfh1)
Mitochondrial biogenesis [BR:
spo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
2541213 (pfh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
Herpes_Helicase
T2SSE
Mg_chelatase
AAA_7
AAA_11
ATPase_2
UvrD_C_2
NPHP3_N
NACHT
NTPase_1
SLFN-g3_helicase
RNA_helicase
AAA_16
ABC_tran
AAA
NB-ARC
ResIII
TrwB_AAD_bind
TniB
RsgA_GTPase
PhoH
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
2541213
NCBI-ProteinID:
NP_596488
UniProt:
Q9UUA2
LinkDB
All DBs
Position
II:complement(join(3567730..3568892,3568934..3570188))
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AA seq
805 aa
AA seq
DB search
MFSCQSLYKFSHSFRKRIPVMFQRAQQKSSLLHTQNESSHQPSLNKLGGFSSASLNFNSS
RSSTNDDQQTFSSQSDNLPSSPITLPAKRGRSAASLKQLDNTVGFDVSKPSLPVFENSGL
GSKYSTEIANGVYIDENDFDDDLLLENDIDQKPIPWSSSPIEHTKLTKSMLSSEKRSKNH
LSKIYEDHTSEKGASSVISSNITRQGIKRSRTLPWAVDPYRYGDPDPKRTSTSADISQHT
VSNDSSNKLSNGRSSSLDSLAKKRMSKSKSTPQISKKFSVPLNSASKSPIGSSLFKTSDS
RKKSVPSIFLSDEQKRILDMVVEQQHSIFFTGSAGTGKSVLLRKIIEVLKSKYRKQSDRV
AVTASTGLAACNIGGVTLHSFAGVGLARESVDLLVSKIKKNKKCVNRWLRTRVLIIDEVS
MVDAELMDKLEEVARVIRKDSKPFGGIQLVLTGDFFQLPPVPENGKESKFCFESQTWKSA
LDFTIGLTHVFRQKDEEFVKMLNELRLGKLSDESVRKFKVLNRTIEYEDGLLPTELFPTR
YEVERSNDMRMQQINQNPVTFTAIDSGTVRDKEFRDRLLQGCMAPATLVLKVNAQVMLIK
NIDDQLVNGSLGKVIGFIDDETYQMEKKDAEMQGRNAFEYDSLDISPFDLPDVKQKKYKL
IAMRKASSTAIKWPLVRFKLPNGGERTIVVQRETWNIELPNGEVQASRSQIPLILAYAIS
IHKAQGQTLDRVKVDLGRVFEKGQAYVALSRATTQEGLQVLNFSPAKVMAHPKVVQFYKQ
LASVNGLPIRNENKAPVQMRGVKNK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgtgccaatctctttataaatttagtcactcttttaggaaacgtatccccgtc
atgtttcaaagagctcagcagaaaagcagcttgcttcatacacaaaacgagtcatcgcat
caaccctccttgaacaaattgggcggtttttcgtccgcttctttaaacttcaattcctct
cgctcctctactaatgatgatcagcaaacattttctagccagtctgataaccttccgtca
tctccaataaccctaccagccaaaagaggtcgttctgctgctagcttaaaacaacttgat
aacaccgtgggattcgatgtttcgaaaccctcactgcccgtttttgaaaattctggcttg
ggtagtaaatactccactgaaatagcgaatggcgtctatattgatgaaaatgactttgat
gatgatctacttttagaaaacgatattgaccaaaaaccaattccttggtcttcatcccct
atcgagcatactaagttaactaaatcaatgctctcgagcgaaaagcggtcaaaaaatcat
ctctcaaaaatttacgaagaccatacttctgaaaaaggcgcaagtagcgtaatatctagt
aatattacgaggcagggaataaaacgctcacgaacccttccttgggcagtggatccttac
agatatggagatcctgatcctaaaagaaccagcacttcagctgatatcagtcaacacact
gtatctaatgattcttcaaataagcttagcaatggacgaagcagttctttggatagtctg
gctaaaaaacgcatgagtaaatctaagtctaccccacagatatctaaaaaattttctgtt
cctttaaactctgcttccaaatcgccaataggatcttctttgtttaagacaagtgattct
cgtaaaaaatctgtccctagcatattcctttccgatgagcaaaaaagaattttagacatg
gttgttgagcaacaacacagtatattttttacgggctctgctggaacaggtaaatctgtt
ctcctccgaaaaataattgaagtcctaaaatctaaatatagaaagcaatctgacagagtt
gctgttaccgcttctacaggcttggcagcctgtaatatcggcggtgtaacacttcactcc
tttgctggggtaggccttgctcgtgaatctgtcgacctcctggtatctaaaataaagaaa
aataagaagtgtgttaatcgttggttgcgcaccagagttttgatcattgatgaagtttct
atggtcgatgctgaattaatggacaagttagaagaggttgcgcgtgttattcgcaaagat
agtaagccatttggtggaattcagttggttttaactggggatttttttcagttacctcct
gttccagaaaatgggaaagaatcgaaattctgtttcgaatctcagacatggaaaagcgca
cttgattttacaataggattgactcacgtttttcggcaaaaggatgaggaatttgtcaaa
atgcttaatgaattgcgcctcgggaaattatctgatgaatcggttagaaaattcaaagtt
cttaatagaacgattgaatatgaagatgggcttcttccgacagagttatttcccacacgt
tatgaggttgagcgttcgaacgatatgcgtatgcaacaaattaatcaaaatcctgtcacg
tttaccgctattgactcgggtactgttcgagataaagaatttcgtgaccgattactgcaa
gggtgcatggctcctgccactttagtgttaaaggtaaatgctcaggtaatgcttataaag
aatatagatgatcagttagtaaatggatctcttggaaaagttataggtttcatagatgat
gagacctatcaaatggaaaaaaaggatgctgaaatgcagggaagaaatgcttttgaatat
gatagtttagacatttcaccctttgatcttccagacgttaagcaaaagaaatataaattg
attgcaatgcgtaaagcttcatccacggcaataaaatggccattagttcgttttaaactt
ccaaatggaggtgaacgtacaattgttgtacaacgggaaacttggaatattgagcttccc
aatggtgaggttcaagcttctagaagccaaattcctcttattttggcttatgcgatatct
attcacaaggcacaaggacagactttggatcgagtcaaggttgatttgggtcgtgttttt
gagaaagggcaagcgtatgttgccttatctcgtgcaactactcaagaaggtctccaggtt
cttaatttttcgcctgcgaaggtgatggcacaccccaaagtcgtgcaattctataaacaa
ctggcttctgttaatggtttgccgatacgtaatgaaaacaaggctccagttcaaatgagg
ggagtcaaaaataagtaa
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