Schizosaccharomyces pombe (fission yeast): 2541340
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Entry
2541340 CDS
T00076
Symbol
nhm1, SPOM_SPBP4H10.20
Name
(RefSeq) m7G(5')PppN diphosphatase
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2541340 (nhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2541340 (nhm1)
Enzymes [BR:
spo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
2541340 (nhm1)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
2541340 (nhm1)
3'-5' decay
Other 3'-5' decay factors
2541340 (nhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS
DcpS_C
Motif
Other DBs
NCBI-GeneID:
2541340
NCBI-ProteinID:
NP_596194
PomBase:
SPBP4H10.20
SPBP4H10.20.1
UniProt:
Q9P7C9
LinkDB
All DBs
Position
II:join(2912228..2912539,2912582..2912787,2912929..2913116,2913163..2913371)
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AA seq
304 aa
AA seq
DB search
MEESSAAKIQLLKEFKFEKILKDDTKSKIITLYGKIRNEVALLLLEKTAFDLNTIKLDQL
ATFLQDTKLVENNDVFHWFLSTNFQDCSTLPSVKSTLIWPASETHVRKYSSQKKRMVCET
PEMYLKVTKPFIETQRGPQIQWVENILTHKAEAERIVVEDPDPLNGFIVIPDLKWDRQTM
SALNLMAIVHATDIASIRDLKYKHIPLLENIRNKVLTEVPKQFSVDKNQLKMFVHYLPSY
YHLHVHILHVDHETGDGSAVGRAILLDDVIDRLRNSPDGLENVNITFNIGEQHFLFQPLT
NMNA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagttctgccgcgaaaatacaactgcttaaagaatttaaattcgaaaaaatt
ttaaaagatgataccaaaagcaaaataataaccttgtacggaaaaatcagaaacgaagta
gcattacttttgctcgaaaaaacagctttcgatttgaacacgataaagcttgaccaactg
gcaacatttctacaagatactaaactcgtagaaaacaatgatgtttttcattggtttcta
agcactaattttcaagattgttctacattgccctctgtgaagtccacactaatttggccg
gcttctgagactcatgtacgaaaatattcttctcaaaaaaagagaatggtgtgtgaaacg
ccggaaatgtatctaaaagtcactaagccgtttattgaaactcaaagaggtcctcaaatt
caatgggttgaaaacatccttactcataaagctgaggccgagcgtattgtcgttgaggat
ccggatcccctgaatggatttattgtcattcctgatctaaagtgggatcgccaaactatg
tctgctctgaatttaatggctattgttcacgcaacggatattgcaagtattcgtgatttg
aaatataagcatattcctcttttagaaaacattcgaaataaagtcttgacagaagtccca
aaacaattttccgtagataaaaatcagttaaagatgtttgtccattatttaccttcctac
taccacttacatgtacatatattgcatgttgaccatgaaactggagacggctctgctgta
ggacgagcaattcttttagacgatgttattgatcgccttcgcaattccccggatggttta
gaaaatgtaaatattacattcaacattggcgaacaacattttctattccaaccgttaact
aatatgaatgcctga
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