Schizosaccharomyces pombe (fission yeast): 2541347
Help
Entry
2541347 CDS
T00076
Symbol
dpb2, SPOM_SPBP8B7.14C
Name
(RefSeq) DNA polymerase epsilon catalytic subunit B Dpb2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03030
DNA replication
spo03410
Base excision repair
spo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
2541347 (dpb2)
03410 Base excision repair
2541347 (dpb2)
03420 Nucleotide excision repair
2541347 (dpb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
2541347 (dpb2)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2541347 (dpb2)
Enzymes [BR:
spo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
2541347 (dpb2)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
2541347 (dpb2)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
2541347 (dpb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Motif
Other DBs
NCBI-GeneID:
2541347
NCBI-ProteinID:
NP_596521
PomBase:
SPBP8B7.14c
SPBP8B7.14c.1
UniProt:
O94263
LinkDB
All DBs
Position
II:complement(join(3656886..3657041,3657082..3657192,3657235..3658752))
Genome browser
AA seq
594 aa
AA seq
DB search
MNNSITDSVEKKPEQVSFEVQPNALRPVAFHVFTRKYDLNINRDSLQELASFVSKKCGSQ
WRSQCEPLLDEIAKTWKRVHETQPIVTRPLLIPVLANLNVPHEVRVSSLARVQTLETTGS
FLNSSNSEIRETIKNEKYFRVLDAFKMPKFKYDSSRKVFVLSKQSPTLMASASACTDMLN
RRFNVVYSRILRNESFQTPSFSGSFSQTGTYQLTPIRNLLGRAGNTFLLFGLLTIAPDGT
LWLEDLDSQVQLDVSQAEQGFGLFCPGCLVLVNGQFLSSGLFLVFELGHPPIERRDASLK
ALNNLDILGLNMDAKQLALLRHAEQAYQSQAFVCISEVHLDNHQTFYALEKIFQKYESSE
AVPFCIILCGSFMSSAFHNSGSSIQYKEGFNKLAASLEKFPKICEKTKFIFVPGPNDPWT
TNGISLMPKHSIPLHFVNRIQRVCKHTIFASNPCRIIFFSQEVLIYRDDISGRFQRNSLK
FGKTPQGTSNINSIPLAEQQVHQQRKLVKTVLDQSHLSPFPSRTRPILWDFDYALSVFPL
PSCMGLIDSESSAFDVHYGGCPTFNPGALLLGVHYNWQEVFPVKKEIITHKERI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattccattacggattcggtagaaaaaaaacctgaacaggttagttttgaagtt
caacccaatgcccttcgtccggttgctttccacgtatttaccaggaagtacgatctcaat
attaatcgtgactcactgcaggaattagcatctttcgtatctaaaaaatgcggctcacaa
tggcgttcccaatgtgagcccttactagacgaaattgcaaaaacttggaaacgagttcat
gaaactcaacctatagttactcgacctcttttgatccctgtcttggcaaatttaaatgtt
ccgcatgaagttcgcgtatcttccttagcaagagttcaaacgcttgagacaaccggttca
tttttaaattcgagtaattcggaaatccgtgaaactataaaaaatgagaaatactttaga
gtccttgatgcttttaaaatgcctaaatttaagtacgattcatcaagaaaggttttcgtt
ttatcaaaacagtctcctactttaatggcatctgcaagtgcctgcacagatatgcttaac
cgcagattcaatgttgtatatagccgtattttacgcaatgaatcttttcaaacaccttct
ttcagtggctctttctctcaaacaggtacatatcaattaactcctattcgcaatttatta
ggtcgagctggaaacacatttttgttgttcggactcttgactatagctcccgatggtacc
ttatggctggaagatcttgacagtcaagttcaactagacgtatcacaggcagaacaaggg
ttcggtctcttttgccctggctgcttggtacttgttaatggtcaatttctaagttctggg
ctatttttagtttttgagcttggtcatcctcccattgaacgccgtgatgcttccttgaag
gcccttaataatttagatattttggggttgaatatggatgcaaagcaacttgctcttctc
cgtcacgcggaacaggcatatcagtcacaagcttttgtttgtatcagcgaggttcatctt
gacaaccatcaaactttctatgcattagaaaaaatattccaaaaatatgaatcctctgaa
gctgtgccgttttgtataatattatgtggaagttttatgtcttccgctttccataattca
ggaagctcaattcaatataaagaaggatttaataagcttgcagcttctcttgagaagttt
ccaaaaatttgcgaaaagacaaaattcatatttgtccccggtccaaacgacccttggacg
acaaatgggatatccttaatgcctaagcattcaataccccttcatttcgtaaatcggatc
caacgcgtttgtaagcataccattttcgcttcaaacccttgccgcatcattttcttttct
caggaagtactaatttatagagacgatatatcaggaagatttcaaaggaattcattaaag
tttgggaagactccccaaggtacctccaatattaattctataccccttgcagaacaacaa
gtgcatcagcaaagaaaattggttaaaacagttttagatcagtctcacctttcaccgttt
ccatcgagaacacgaccaatattgtgggattttgattatgctttatcagttttcccgctt
cctagctgtatgggtctaatagattctgagtcgtcggcgtttgatgttcattatggaggt
tgcccaacttttaatcccggtgctcttttacttggcgttcactataattggcaagaagta
tttccagtaaaaaaagaaataattacacacaaggagagaatttag
DBGET
integrated database retrieval system
