Schizosaccharomyces pombe (fission yeast): 2541383
Help
Entry
2541383 CDS
T00076
Symbol
dbp2, SPOM_SPBP8B7.16C
Name
(RefSeq) ATP-dependent RNA helicase Dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2541383 (dbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spo03041
]
2541383 (dbp2)
03009 Ribosome biogenesis [BR:
spo03009
]
2541383 (dbp2)
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
2541383 (dbp2)
Spliceosome [BR:
spo03041
]
Complex A
U1 snRNP components
U1 related factors
2541383 (dbp2)
Complex B
2541383 (dbp2)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
Pre-60S particles
Helicases
2541383 (dbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
2541383
NCBI-ProteinID:
NP_596523
PomBase:
SPBP8B7.16c
SPBP8B7.16c.1
UniProt:
P24782
LinkDB
All DBs
Position
II:complement(join(3662854..3663206,3663906..3665137,3665234..3665301))
Genome browser
AA seq
550 aa
AA seq
DB search
MSYRDNEYSGNYNGKEDGYNSRGRYGGGYRNNYSRGGGRGGFNDGASYGYDQRGQGRNFY
ESDGPGANLVKKDWKNETLIPFQKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKP
VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPA
IVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIR
DLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPD
RQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKD
IEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKS
PIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQ
ARELVSILSEAKQDIDPKLEEMARYSSGGRGGNYRRGGYGRGGFRRGGGYGNRNRGFTGS
NSAPLARSRW
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagagataacgaatatagtggaaattacaatggaaaagaggatggctataac
agcagaggtcgttatggtggcggataccgcaataactatagtcgtggcggcggtcgtgga
ggtttcaatgatggcgcttcttatggctacgatcaacgaggacaaggaagaaatttttac
gagtcagatggtcccggtgctaatttggtaaagaaggattggaaaaatgaaactttgatt
ccgtttcaaaaagatttttataaagaacatgaaaatgttcgcaatcgttcagacgctgaa
gtcaccgaataccgtaaagaaaaagaaattgtcgtgcatggattaaatgttcctaaacct
gttacgacatttgaagaggctggttttcctaactatgtactaaaggaagtcaaacaattg
gggttcgaagctcctactcctatccaacaacaagcatggccgatggctatgtctggtaga
gatatggtaggcatttcagctacgggttctggtaagacactttcttattgtcttcctgct
atcgtacatattaatgcccaaccactactttctccaggcgatggtccaattgtactcgtt
cttgctccaacgcgtgaattagctgtccaaattcagcaagaatgtactaaatttggcaaa
tcatcccgaattcgcaacacatgtgtgtatggtggtgtccctcgtggtccacaaattcgt
gacctaattcgcggtgtcgaaatttgcattgcaacacctggtcgtttattggatatgtta
gactctaacaaaaccaacttacgtcgtgtgacctatttagtgctggatgaagccgaccga
atgcttgatatgggttttgaacctcaaattagaaagattgttgatcaaattcgaccagac
cgtcaaactgtcatgttttctgcaacatggccaaaagaagttcaacgtcttgctcgtgac
tatttgaatgactacattcaagtaactgtcggctctttggatttggcagcttctcataac
attaagcaaatcgtagaagttgttgacaatgctgataaaagagctcgtcttggaaaggat
atcgaagaggttttgaaggatagggataacaaagttcttatttttacaggcacaaaacgt
gttgctgatgacattactcgcttccttaggcaagatggttggcctgcccttgccattcat
ggtgataaagctcaagacgagcgtgactgggtactcaatgagttccgtactggcaagtct
ccgattatggttgctactgatgttgcttctagaggaatagatgttaagggtattacacat
gtctttaactatgatttccctggaaatacggaagactacgttcatagaattggacgtact
ggtcgtgctggagctaaaggtaccgcatatacctatttcacttcggataatgctaagcaa
gctcgtgaacttgtttccattctctctgaagccaagcaggacattgatcctaagcttgag
gaaatggcccgctattcaagcggtggtcgtggtggtaactaccgccgtggcggctatggt
cgtggtggtttccgtcgtggaggaggttatggaaaccgtaataggggttttaccggaagt
aattctgccccccttgcgcgttcacgttggtga
DBGET
integrated database retrieval system
