Schizosaccharomyces pombe (fission yeast): 2541438
Help
Entry
2541438 CDS
T00076
Symbol
ssr3, SPOM_SPAC23G3.10C
Name
(RefSeq) SWI/SNF and RSC complex subunit Ssr3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
2541438 (ssr3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2541438 (ssr3)
03036 Chromosome and associated proteins [BR:
spo03036
]
2541438 (ssr3)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
2541438 (ssr3)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
2541438 (ssr3)
PBAF complex
2541438 (ssr3)
GBAF(ncBAF) complex
2541438 (ssr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
2541438
NCBI-ProteinID:
NP_593110
PomBase:
SPAC23G3.10c
SPAC23G3.10c.1
UniProt:
Q9P7S3
LinkDB
All DBs
Position
I:complement(885895..887172)
Genome browser
AA seq
425 aa
AA seq
DB search
MSNNSRLPENGVQSGNGEDAELKKSMRIIEREIPDSLLEKIPEAEDYIALQDLERKLDSL
IVRKRFDLQDSLSRNSHKTRILRMYIHSTVANQSWQQKGENQENNSGDINSLPIPEWTLH
IEGRLLVNPDDEDDKAFELAPFTNFFRKIAIQILRSDDLYPSGNYVEWNKLPDNSNTSNG
ITVTRKGDQSVDVKIMLYPEEHPERYKLSKAFANILGIREGTRPDIVSYLWQYIKFHRLQ
DMEEKRLINCDKALRDLFEADRLYFPRIPELMNRFLEPIDPIVIPYTINVSEHTVEKVTI
FDIRINTEDPRHSQIRSFLATMMSQDKIRSIDDKLTELIQAITYSQSKYDFMKKFSESPI
EFINEWIESQSRDLEIVLDGTNMNYAEKRSADYYQQPWVHESAFHYLNLLNSKKQQSVLN
ASAKK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatagccgtttaccagagaatggtgtacaaagcggtaacggagaagacgca
gagttgaagaagagtatgagaattattgaaagagaaattccagactcattgcttgaaaaa
atcccagaagcagaagattatattgctcttcaagatttagaaagaaaattggattcatta
atcgttcggaaacgatttgatttacaggattccttaagtcgaaactctcacaaaaccagg
attcttcgtatgtacatacattccactgttgcgaatcaatcatggcaacaaaagggagaa
aatcaagagaataattctggcgacattaactcccttcccatacctgaatggactctccat
attgaaggtagactactcgttaatcctgacgacgaagacgataaagcttttgaattagca
cctttcaccaactttttccgtaaaattgctatccaaattttacgatcagatgatctctat
cctagtggtaattatgttgaatggaataaacttccggataactctaatacatctaacggc
attaccgttacgagaaaaggcgaccaatccgtagatgtcaaaattatgttataccctgaa
gagcatcctgaacgatataaactttcaaaagcctttgctaatatactgggtattcgtgag
ggcactcgtcctgacatcgttagctacctttggcaatacatcaagttccatcgcttgcaa
gacatggaggagaaaagattaattaactgtgataaggcattaagggatttatttgaagca
gatcgtctttacttccctagaattcctgagcttatgaatagatttctcgaacctattgat
cccattgttataccgtataccattaatgtcagtgaacatactgttgaaaaagttacaatt
tttgatatccgtatcaacacggaagatcctaggcacagccaaattcgctctttccttgct
acgatgatgtcgcaagataaaatcagaagtattgacgataagcttaccgagttaattcaa
gctatcacttactcacagtcgaagtatgatttcatgaagaaattttcggagagtccaatt
gaatttattaacgaatggattgaatcccagagccgagatttagaaatcgttttggatggc
acaaatatgaattatgcagaaaaaagaagtgctgattattatcaacaaccctgggtacat
gagagtgcatttcattatcttaatttactaaatagcaaaaagcagcaaagcgttttaaat
gcttctgctaagaagtga
DBGET
integrated database retrieval system
