Schizosaccharomyces pombe (fission yeast): 2541575
Help
Entry
2541575 CDS
T00076
Symbol
SPOM_SPAC12B10.01C
Name
(RefSeq) ubiquitin-protein ligase E3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
2541575 (SPOM_SPAC12B10.01C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spo04121
]
2541575 (SPOM_SPAC12B10.01C)
Enzymes [BR:
spo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
2541575 (SPOM_SPAC12B10.01C)
Ubiquitin system [BR:
spo04121
]
Ubiquitin ligases (E3)
HECT type E3
2541575 (SPOM_SPAC12B10.01C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
UNC45-central
Htt_N-HEAT_1
CLASP_N
EAV_GP5
Motif
Other DBs
NCBI-GeneID:
2541575
NCBI-ProteinID:
NP_594633
PomBase:
SPAC12B10.01c
SPAC12B10.01c.1
UniProt:
Q10435
LinkDB
All DBs
Position
I:complement(4570498..4575441)
Genome browser
AA seq
1647 aa
AA seq
DB search
MSVQAYTNTPNLPNLIHSESITNSPVFIPNLRSKSDNKHRLNTSEELPFTKKRRATKHFL
KMEVSAKISEPPSSKSVEFGRHLNMRHDFSELLEQPLTTSKTRVFKSFNEKLKGKPQLVK
SDKGVLPLNKQSDILNSYERVLSNASVDSALDKKAEVDIIPFDKSVMEPKNITFNDKSGL
TKFGNSNSYETTYSDSSNYHTSTDSSQYNDQDDHVYDDTNDGTDDDINNNEYKDDESSSG
SESYERDEDVDEEEEEDDDENNDEGDDEDENENDELRSENGSPNPSAAVINEQENMNMSG
IEEYDETNLLNELGRIRRGNQFQSLASSILSSGNLENSDDEDVSLGPQTYRFNSSFHPFR
SAFSAPGVQFGRLLEGIKDFSDPTVQMLSLQELSEAFAMSTEDMLVGLFSTDSYIAAFSE
ILSGRNYDFGEVSIQLMLSCTTCVSNMMEALPLCMAKIAYSPIVRILCERMFDMQYIDIA
EQALGVLERLSKDFGICILEHRGMLAALQYFDFFYTTVQRTAISLAANCCKFLDESNASA
AEEIIPLLSNILQSSDTIVVSKAYSCLETIIESLKTSPNIIETIISEDLITTIVNALTNS
TSQNKSMHLQVQLLHIISSLCQSSSALILPFLNHNLPDVMYEMLCGIPPSDTSHQADMIT
MQSLYYCPIELIENLLRAITSLLPKNTSNLSDEFNTKLYRLNSILLTVVMDIYFIVPLHD
IRSLAVTTALKMLCSIRENNLDGLVCSLPLSSFIASILNSRKSDNFLKRDALEMCLFLLE
ALPNVYSSLFIREGVVQEVGFLVRSTNADMKKIKLSISFSQNKSAARHEELKNLSTLKSL
AKEFLSNYKEENLENSTLVQLKQLSKHLLSETKQDESFSELAKIFQEGSNITSHELLHSG
LIHNLLLSLKKFGSSSLRTFLLAMNTCDEREVLEFGNGPLVSLIFCLQNLLSTVENFQLS
TLPPDTENAVDHVFSRQFKLRLMALPGSRIRPPFRSLVVSINGLATIRTLDNYLHSRISV
RNETGRRFSILREAGSLRESMSGSSRNSSGDYTDSMSQDAPNHTTEPSERRDSSTSSHFE
EHFVFSLMGKKVPRNKTIFRILYEYIQLSDDHTLDDFWKTPVPIFYGEPDCIHNDMKGEL
NYENETEGFSINIREILDLLSILYYGIRDVHTLFPDKHFRGNIENILTDFSNWKLSAKLN
RQLEEQQLVVHGCLPSWCISLTSAYPFLVPFETRYLLLQSTAFGLSRSVSFLLSRNPELS
KNESSSILQFVSLHRQKIRISRKKIFNYALHLLATYAASENILEIEYEDEVGSGLGPTLE
FYTSVSKEFTLNSLDIWRNDQPNSKFVYQASGLFPSPIPLLGSSPENERKISLFFALGQF
VARSIYDSRIISIQFNPLFFARNIPLTISSVAKVDKGLANSLRYLEKLIPGKNPTNAETD
IKLEDLHLDFTLPGFPSIELIPDGASTPVTTFNVSDYLNYVIDYTVGKGVQQQLEAFQNG
FSSVFPYTSLQVLTEHELVTLFGTVDEDWSYATLMKSIVADHGYTMESPTIQRLLTLMSQ
MNFQEQRDFLQFITGSRKLPIGGFAGLNPPLTVVRRLNEPPYVPDDYLPSVMTCVNYLKL
PEYSSSEVLGSRLSKAILEGQGSFHLS
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcaagcgtatacgaatactccgaatttaccgaatttaatacatagtgaatct
ataaccaactcacctgtgtttataccaaacctacgaagtaagtccgacaacaaacataga
ttaaacacttctgaagaattgccatttacaaagaaacgcagagcaactaaacatttttta
aaaatggaggtatctgccaaaatttctgaaccaccttctagtaaaagtgtggaatttgga
aggcatttaaatatgcggcatgatttttccgaattgcttgaacaaccacttacaacgagc
aaaactagggtctttaaatcctttaatgaaaagctcaaaggtaaaccccagttagtgaaa
tccgataaaggtgtgttgcctcttaataagcaatcggatatactgaattcttatgaacgc
gttttaagcaatgcttcggttgattctgcattagacaaaaaggcggaagttgatatcatt
ccatttgataaatcagttatggaaccaaagaacataacttttaatgacaaaagtggctta
accaagtttgggaattcaaactcttatgaaactacgtattctgactccagcaactatcat
acttctactgattcgtcccaatataatgaccaagatgaccacgtctatgatgatactaat
gatggaactgatgatgatataaataataacgagtacaaagacgatgaatccagtagtggc
agtgaaagttatgaaagagatgaagatgttgatgaagaggaggaagaagacgatgatgaa
aacaatgatgagggagacgatgaagatgaaaatgaaaatgacgagttaagaagcgaaaac
ggttcacctaatccttcagccgctgttattaatgaacaagaaaacatgaacatgagtgga
atcgaagaatacgatgaaactaacttgttaaatgaactgggaagaatcagaagaggtaat
cagtttcaaagtttagcgtcttctatactttcttccggtaatttggagaactctgatgac
gaagatgtttctttaggtccacagacataccgtttcaatagttcctttcatccttttcgt
tctgcattttctgctccaggtgttcaatttggacgcttgttagaaggaataaaggatttt
agtgatcctactgttcaaatgctttctcttcaagaactttccgaagcgtttgctatgagt
actgaagatatgcttgttggattgttttcaaccgattcatacattgcggctttttccgaa
atcttatctgggcgaaattatgatttcggagaagtctctattcaacttatgctatcctgt
actacctgtgtatctaatatgatggaagctttgcctttatgtatggctaaaatagcatat
agtcctattgttcgcattctgtgtgaaagaatgtttgatatgcaatacattgatattgct
gaacaagctttaggagttttagaacggctttctaaagattttggtatttgtattttggaa
cacagaggaatgttagctgctctccaatactttgattttttttatactacagttcaacgg
acagctatttctctggctgctaattgctgtaagtttttggatgaatccaatgcttccgca
gcagaagaaattattccattgctttctaatattctacaatcttctgataccatagtcgtt
agtaaggcatattcttgcctggagacaattattgaatctttgaaaacttcaccaaacata
attgaaacgataatttccgaggatttgatcaccactattgtcaatgctttgactaattct
acctcacaaaataagtcaatgcacttacaagtgcagctattacatataatatcatctttg
tgtcagtcatcttctgctttgattttaccttttcttaaccataatttgccggatgtgatg
tacgaaatgctgtgtggaataccaccttctgatacatcccatcaggctgatatgattaca
atgcaaagtttgtattattgtccgatcgagttaatagaaaacttgttaagagctataact
tctttgcttcctaaaaacactagtaacttgtctgatgaatttaacacgaaactatatcga
ttaaacagtatactcttaactgttgtaatggacatttattttattgtgccccttcatgat
atccgatcgttagctgtgactacggcattgaaaatgttatgttcaattagggaaaataat
ttagatggcttagtttgttctcttcctttatcatcattcattgcttcaattttaaattca
cgcaaatctgacaatttcttgaagcgagatgctttagaaatgtgtctatttttgcttgaa
gcacttcctaatgtttattcttcgttatttatacgagaaggcgttgtacaggaggttgga
tttttagttcgctctaccaatgcagacatgaagaaaataaagttaagtatttccttttca
caaaacaaatctgctgctcgtcatgaggagttgaagaatttatcgacgttaaagagcctt
gccaaggagtttctctctaattataaggaagaaaatttagaaaactcaacattagttcaa
cttaaacaattgtctaaacatttattaagtgagaccaaacaagacgaatctttttcagaa
ctagccaaaatatttcaagaaggatctaatattactagtcatgaattacttcattctgga
ttaattcataatttgcttttatcactcaaaaaatttggaagttcatctcttcgaacattt
ttgttagctatgaatacatgtgatgaacgcgaagttttagaatttggtaatggtccctta
gtttcacttatcttttgtttgcaaaatctactttcaactgttgagaattttcaactttca
acgttacccccagatactgagaatgcggtagatcatgttttttcgcggcagtttaaactt
cgtttaatggctcttccgggatcaagaattcgaccacctttccgatctcttgtcgtttct
attaatgggctagctactattcgtacacttgataattatcttcacagtcgcatttctgtg
cgtaatgaaactggacgtcgtttttcaatcctccgcgaggccggttctttgagggagtca
atgagtggatcatctcgtaactcttcaggagactatactgactcaatgtctcaagatgct
cctaatcacacaacagagccatcagagcgacgtgactcctcgacatcatcacatttcgag
gaacattttgtattcagtttgatgggtaaaaaggtaccccgaaacaaaacaatattcaga
attttatatgagtatatacagttgtctgacgatcatactctcgatgatttttggaaaact
cctgtcccaatattttatggtgagcctgattgcattcacaatgatatgaaaggggagtta
aactatgagaatgaaacagagggattttctataaatattagagaaatattggatttattg
agtattttgtattatgggattagagacgttcataccctctttcctgacaaacatttccgt
ggcaacattgaaaacattcttacagattttagcaactggaagttgagtgccaaattgaat
agacaacttgaagagcaacaacttgttgttcacggttgtttaccctcctggtgtatatca
ctaacctctgcatatccattcctagtaccgtttgaaactcgatatcttttattgcaatct
actgcttttggtttatcaagatccgtttcttttcttttgtcccgaaatcctgagctatca
aaaaacgaaagttcctccatacttcaatttgtcagcttacatcgccagaaaattcgtatt
tctcggaaaaaaatatttaattacgctttgcatttgcttgcaacttatgcggcttctgaa
aatattcttgaaatagaatacgaagatgaagttggttcaggtcttgggcccactttggag
ttctatacttcagtatctaaagaatttaccttaaattctctcgatatttggcggaatgat
caacccaactctaaatttgtgtaccaagcgtctggactttttccttctcctattccatta
ttagggtccagtccagaaaatgaaagaaaaatttcgttgttctttgctcttggacagttc
gttgcacgctcgatttatgattcaaggataataagcattcagtttaatccacttttcttt
gcacgaaatatacctttaaccatttcctctgtagcgaaagttgacaagggcttagctaac
tcgttacgatatttagagaaattaataccgggtaaaaaccctacaaacgccgagacggac
attaagcttgaagaccttcatctcgattttactctaccgggatttccgtctattgaactc
atacctgatggagctagtacacctgtgacaacattcaatgtgagtgattatttaaattat
gtcattgactatactgttggaaagggtgttcaacaacaattagaagcatttcaaaatggg
ttttccagcgtttttccttatacttctttgcaagttttgacagaacatgaattggtcaca
ctattcggtactgtcgatgaggattggagttacgcgaccttgatgaaatctatagtagca
gatcacggttacaccatggaaagtcctacaatccagagattactgactttgatgagtcaa
atgaattttcaagaacaaagagactttttgcaatttattactggaagccgaaaacttcct
attggaggatttgctggcctaaatcccccgttaactgttgttaggcgcttaaatgaacct
ccttatgtacctgatgattatcttccaagcgtgatgacttgtgtgaattatttgaaacta
cctgagtattcttcaagtgaggttttaggaagtcgactttctaaggctattttagaagga
cagggcagttttcatttatcctaa
DBGET
integrated database retrieval system
