Schizosaccharomyces pombe (fission yeast): 2541600
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Entry
2541600 CDS
T00076
Symbol
rna14, SPOM_SPAC6F12.17
Name
(RefSeq) cleavage and polyadenylation specificity factor complex subunit Rna14
KO
K14408
cleavage stimulation factor subunit 3
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
2541600 (rna14)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2541600 (rna14)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
2541600 (rna14)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_15
HAT_Syf1_CNRKL1_C
UTP6_C
Motif
Other DBs
NCBI-GeneID:
2541600
NCBI-ProteinID:
NP_593303
PomBase:
SPAC6F12.17
SPAC6F12.17.1
UniProt:
O14233
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All DBs
Position
I:join(1348780..1350871,1350915..1351024)
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AA seq
733 aa
AA seq
DB search
MNSDDNVEADASSNIIKDSPKIKEQENTSTVNESDVLATSTTASSGVKRKRLPNDLVGQL
RDKIQENPNDISSWYALVEEYGSKGKHEELRETYEQMLRPFPYVPRVWVDYISSELAFND
FHAVELLFSRCLVKVLSVDLWTLYLSYIRRINPDGEGQSRSTITQAYEFVINTIGVDILS
GPIWSEFVDFLRSGPANSTWEQQQKLDHVRRIYQRAITTPIHNIEKLWRDYDAFENSVNR
ATARKFVAEKSPVYMAARAAMRELSNLTEGLRVYDFTFERKYTKVERIAYSRWMNWIKWE
QSDPLDLQHGTMLQNRIAYAFEQAMLYVPLCPQIWLDGFSYFLSISDEQRALQTIRRGMR
YCPSNFVLHVRYAEHEEANNRTSEIRSTYESLIAALAREISQLDSKASSSSESSTDGNPQ
EKKLPEHLVKRKSRLVRQYSLAWCCLINAIRRTEGVKAARAIFTKARKAPYQSHEIYIAS
AMMEHHCSRDPVIASRIFELGMRHFGDVPAYVYKYLSYLIAINDETNARALFEKAIPRIA
ADEAKPIYQKWLDYESNYGDLNAAIALSQRMAVVYPQESTQAIFLSRYGLKDDAEEEERE
TKEAEKIRELSVRLNGGNGFPGHVHNNREDDEVSIASTSSKSNVEMEDTRLLPASLELAN
TQGASNPPTSALPTVPVPLPSIITEFLDELPAPQVITGPRIQPTKLIDHIIKSDIPFIRL
RNANAHLKRARFN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgatgacaatgtcgaagccgatgctagctcgaatattataaaagattctcca
aaaattaaagaacaagaaaatacctcaacagttaatgagagtgatgtattagcaacttcg
acgactgccagtagtggtgtaaaacgaaaacgtctcccaaatgaccttgtaggacaatta
cgggataaaatacaagagaaccctaacgatatttcttcttggtatgcactggtagaagag
tatggatctaaggggaagcacgaagagttaagagaaacttatgaacaaatgttgcgacct
tttccttacgttccacgagtttgggttgattacattagttctgagcttgcctttaacgat
ttccatgccgttgaattgttatttagtcgatgccttgtcaaggttttatcggttgattta
tggacgttgtacttaagttacattcgtcgaataaatccagatggtgaaggacaatctcgt
tctacaattactcaggcttatgagtttgtaataaatactattggtgttgacatactcagt
ggccctatatggtctgagtttgtggattttttacgttctggcccagctaattcaacatgg
gagcaacaacaaaaactagatcatgttcgtcgaatttatcaaagagctatcactacacct
atccataatattgaaaaactttggcgtgattatgatgcattcgaaaatagtgtaaacaga
gcaacggccagaaaatttgtagctgagaagtctcctgtttatatggcggcgcgggcagca
atgagggaactttcaaaccttacagaaggactcagagtttacgattttacctttgaacgt
aagtatacaaaagttgaaagaatagcgtattcccgttggatgaactggattaaatgggaa
caaagtgatccattagatttacaacatggcacgatgttacagaatcgaattgcttatgcc
tttgagcaagcgatgttgtatgttcccctttgtccgcagatatggctcgatggattttct
tactttttgagcatttcggatgaacagcgtgctcttcaaactattcgtcgcggaatgcgt
tattgtccttcaaattttgttttacacgttcgctacgcggaacatgaagaagcgaataac
cgtacatctgaaatccgctctacctacgaatctttaattgcagctttagctcgggaaatt
agtcaattggactccaaagcatcgtcgtcctctgaaagctcaacagatggaaaccctcaa
gaaaaaaaattacctgaacacctagtaaagcgtaaaagtagacttgttcgtcaatacagt
cttgcttggtgttgtttaataaatgctattaggaggactgaaggcgtgaaagcagctaga
gctatatttaccaaagctcgaaaagcaccatatcagtctcatgagatatatatagctagc
gcgatgatggaacatcattgttcgagggatccggttattgcctctcgaatttttgagttg
ggtatgagacattttggagatgttccagcctatgtttataaatatttgtcatacttaata
gctataaacgatgaaactaatgctcgcgcgctatttgagaaagccatcccgaggattgca
gctgatgaagctaaacccatatatcaaaaatggcttgactatgaaagtaattatggcgat
ttgaatgcagctatagcacttagtcaaagaatggctgttgtttaccctcaagagtccaca
caagccatatttttatcgcgctatggcttgaaggatgatgctgaggaagaagaacgggaa
acaaaagaagcggaaaaaattagagaactatctgttcgcttaaatggaggaaatggattc
ccgggccatgttcataacaacagggaagatgatgaagtttctatagcctctacctcttct
aaaagtaacgtcgaaatggaagatactcgtttacttcctgcgtctttggaattagcaaac
actcaaggagcatcgaatccacctacttcagcacttccaactgttccggtaccgttacca
tctataataaccgaatttttggatgaactcccagctcctcaagtaataactggtcctcga
atccaaccaacaaaacttatcgatcatattattaaatcagatatccctttcattcgttta
cgaaatgcaaatgcacatttgaagcgtgccagatttaattaa
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