Schizosaccharomyces pombe (fission yeast): 2541605
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Entry
2541605 CDS
T00076
Symbol
spt6, SPOM_SPAC1F7.01C
Name
(RefSeq) transcription elongation factor Spt6
KO
K11292
transcription elongation factor SPT6
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2541605 (spt6)
03036 Chromosome and associated proteins [BR:
spo03036
]
2541605 (spt6)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
2541605 (spt6)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
2541605 (spt6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Spt6_S1
SPT6_acidic
Tex_central_region
S1
SH2
Tex_YqgF
HHH_9
S1_RRP5
HHH_3
Motif
Other DBs
NCBI-GeneID:
2541605
NCBI-ProteinID:
NP_594487
PomBase:
SPAC1F7.01c
SPAC1F7.01c.1
UniProt:
Q09915
S6BMF4
LinkDB
All DBs
Position
I:complement(4212706..4216803)
Genome browser
AA seq
1365 aa
AA seq
DB search
MSENEVVGSPTTNGDKNEDGYPAENGEGTNVDDNNNEEEKDGIPLDNDNDENDSSEESAT
DEEAERQVREGFIVEDEEDEVPQEIRRKKKRKKHAESTADQDMLDEEDLELVMENTGQGS
RFSKLRRLKRGRDQEETLENIFSEEEEEEENEVDDEAPNRTQGHRAGVIDEFADFIEQDE
FEDEERQEEKYETGPPIESVRPEALGISDDDYIQIYEVFGDGTDYAFALEDEDAEDELEE
SVSLKTIFEPSELKDKMLTEEDEIIRITDEPERMQLYMKRNIDCSEDEFREQVAWIIDYL
LKNRRDIDAELYEPFQTAVRYVVHFFIRDSLEVPFIWQHRRDYIVHNNRERNTITPLLSQ
NDLWNIFFLCTKFWSLHSKKQDILKLYSDLGINDDLVVPFCEAASSLDAIDDLNDYIHFT
YSEQIRDRALLMGTGLRRPQGSKYSFFEKFRKSSLYNLVKEFGMSAKDFSFNVAQGARLR
FVEDNTLSPEELSRTYVTNELSSPEQVLQKARRVLAEEIIHDPQFRKSFRDKLYNAGVVT
VLATQKGVRKIGSEHPYYEFKYLKRKPLGSFELEPILFLKMLKAEEEGLIQLSIEFEDPD
DVFKGLLELFVSDNFSENAMQWNAQRELVLKEVFKRFSALAPDAIRETLRSRYLDELGMR
CRNQLFSRLDQAPYEPSTKNFDRGTIPSVLAVSNGKGESSDAIICVFVDDVGEPTDSLKL
ADLRDLANQAMFAEFVEKVKPDVIGVSGMSVSAHKIRQHVQDSLTSHEPVDLIMVNDEVA
RLYQNSTRAVDEFPTLPTISCYCVALARYVQNPLFEYAAMGRDLMSLSFDPWQHLLPPDV
LWKYLETALVDISSLVGIDINEAVTNKYEANILPYIAGLGPRKADYVLKKIAATGGRIDN
RSDLISKQIMSRKVFINCSSFFIIPNDEYPNMDILDSTRIHNEDYELARKMASDALELDE
EDIEELETNRGVVYHLLEENETGKLDELVLEEYADQLEREFHQKKRNTLEKIRLELKDPY
GEQRNVFHKLTPSEIFLMLTGENPEELQADAIVPVNVRRVTNRFVAVKLDCGIDGNIKAD
EVSDDFIPPPQLLQVGQTVEGVIISLDEANFMVDLSLRNSVLQSANSKRQTSSHRTSYWD
TEAEKRDTERMQAETQAEQRVARVIKHPLFKDLNASQAEAYLSKMQVGDLVIRPSSKGSD
HIVVTWKVAEGSYQHIDVLELEKENEFTIGQKLLVKGRFEKMTYQYSDLDELIVLHIKAI
AKKIDEMCIHDKFRKGTQAETEKWLESYSEANPKRSCYAFCFDHQHPGYFILCFKASVNS
PVTAWPVKVIPNAFFLQGNVYGDMTALCNGFKLLYAARTKNFRRM
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaacgaagttgtcgggtcaccaaccaccaatggtgataaaaatgaggatggt
tatccagctgaaaatggagaaggcacaaatgtggatgacaacaacaatgaagaggaaaag
gatggaattcctttagataatgacaatgatgagaatgactcttctgaagaatctgcaact
gatgaagaagctgagcgacaagttagagagggtttcatcgtcgaagatgaagaagacgaa
gttcctcaggaaattcggcgcaaaaagaaacgtaagaagcatgccgaaagtactgctgat
caagatatgcttgatgaggaagatctggaacttgtcatggagaatacaggccaaggctct
cgtttttctaagttgagacgtttaaaacgtggaagagatcaagaagagactcttgaaaac
atattttctgaggaagaagaagaagaagaaaacgaagtcgatgatgaagctcctaatcgc
acgcaaggccaccgcgctggcgttatcgacgaatttgcagatttcattgaacaagacgaa
tttgaagacgaagagcgtcaagaagaaaaatatgagactggtccgcccatagaatcagta
cgacctgaggctttaggaatatcggatgatgattatatacaaatatacgaagtctttggc
gatggaacagattacgcatttgcccttgaagatgaagatgctgaagacgagttagaagag
tctgtcagtttgaagaccatttttgagcccagtgaactaaaagataaaatgcttaccgag
gaggatgagatcataagaatcacggatgaacctgaacgtatgcaactttatatgaagagg
aacattgattgctctgaagatgaatttagggaacaagttgcttggattatcgattatctc
ttaaaaaataggcgtgatattgatgctgaactatatgagccgtttcaaactgctgttcgc
tatgtagttcacttctttattcgtgatagtcttgaagtacccttcatatggcagcaccgt
cgtgattatatagtgcataacaatcgtgagaggaacacaattactcctttattaagtcaa
aatgatttgtggaatatttttttcctttgcaccaagttttggtcacttcattctaagaag
caagatatcctaaaattgtactctgatttgggaattaatgatgatttagtagttcccttc
tgtgaagctgcttcctctcttgatgcaattgatgaccttaatgattacatacatttcact
tattctgaacaaatccgtgatcgtgccttactgatgggtactggtcttcgtcgtccacaa
ggttcgaagtattctttttttgaaaaatttagaaaatcatcactttacaatctcgtcaaa
gaatttggtatgagtgctaaagacttttcgttcaacgtagcacagggtgctcgtctccgt
tttgtggaagacaacaccctttcgcctgaagaactaagtcgtacttatgtgacaaatgag
ctgtcatcacctgagcaggtacttcaaaaggcacgtagagttttagcagaggaaattatt
catgatcctcaatttcgaaagtctttccgtgacaaattgtacaatgctggagtcgttact
gttttggccactcaaaaaggtgtccgtaaaataggtagtgagcatccttattatgaattt
aagtatttaaaacggaaacccttgggctcgtttgagttagagccaatcctatttttaaaa
atgttaaaggccgaagaagagggcttaattcaactatcgattgaatttgaagatcctgat
gatgtttttaaaggtttactcgagctttttgtttcagataatttttctgagaacgcaatg
caatggaatgctcagagagaattggtattaaaagaagtatttaaaaggttttctgcatta
gcacccgatgccatacgtgaaactttacgttctcgatacctggacgaacttggaatgcgc
tgccgaaatcaattgttttcaagacttgatcaagctccctatgagccctcaactaaaaat
ttcgatcgtggcactattccatcagtccttgccgtctccaatggaaaaggtgaatcgtct
gatgccattatctgcgtatttgttgatgatgtgggtgagcctactgattcattaaaactt
gccgatctacgagatcttgctaatcaagcaatgtttgctgaatttgtcgaaaaagttaag
ccagatgttataggtgtttcgggaatgagcgtttctgctcataaaattcgtcaacacgtt
caagattcgttaacgtctcacgaaccagtagatctaatcatggtgaatgatgaggtcgct
cgtctatatcagaattctactcgtgctgttgatgaatttcctactctaccaactatttct
tgctactgtgttgcattggctcggtatgtacaaaaccctctgtttgagtacgctgctatg
ggtcgtgatttgatgtctttatcatttgatccttggcaacatttgcttccccctgatgtt
ctctggaaatacttggaaactgcgttagtcgatatatcttctttggtgggtattgacatt
aacgaagcagtgactaacaaatatgaagctaatatacttccctacatagcgggattaggt
cctcgcaaagcagattatgttttaaagaaaatcgctgctaccggtggacgtattgataat
cgtagtgatttaatttcaaaacaaataatgtcgagaaaagttttcattaattgctcttct
ttcttcattattcctaatgatgagtatcccaatatggatattttagattctacaaggata
cataatgaagactacgagttagctagaaaaatggcaagtgatgcactagaacttgacgag
gaagatattgaagagcttgaaaccaatcgaggggtggtttaccaccttttagaggaaaac
gaaacaggaaaacttgatgagcttgttcttgaagagtatgctgatcaactggaacgtgaa
tttcaccagaagaagcgaaacactcttgaaaagatccgtctggagttgaaggatccttat
ggagagcaaaggaatgtattccataagctgacaccttcggaaattttcctaatgttaacc
ggagaaaatccagaagagttgcaagcagatgcaattgtacccgtgaatgttaggcgagtt
actaataggttcgttgccgtcaaactcgattgtggaattgatggaaatattaaagccgat
gaagtgagtgacgattttataccccctccccaattgcttcaggttggtcaaacagtcgaa
ggtgtaattatttctttggacgaggctaattttatggttgatctttcacttagaaatagt
gttttacaatcggcaaattctaaaagacaaactagctctcatcgtacatcttattgggat
actgaggctgaaaagcgggatactgagaggatgcaggccgaaacacaggctgaacaacga
gttgctcgcgtaattaagcacccgttatttaaggatttaaatgcctctcaagccgaagca
tatctgtcgaaaatgcaagttggcgatctagttatacgtccatcttctaagggctctgac
catattgtcgttacatggaaagtcgctgaaggctcctaccaacatatcgatgtgttagaa
ttggaaaaagaaaatgagtttacaattggtcagaaattactagtaaagggaagatttgaa
aaaatgacttatcaatacagtgatctcgatgagctgattgttttacatattaaagccatt
gctaaaaaaatagatgaaatgtgtatacatgataaatttcgaaagggtacacaagcggaa
accgaaaaatggcttgagagttattctgaggcaaatcctaaacgatcctgttatgcattt
tgctttgatcatcaacatcctggatactttatcttatgtttcaaagctagtgttaatagt
cctgtaacggcatggccggtgaaggttattccaaatgcgttttttttacagggcaacgtt
tatggtgatatgactgcactttgcaatggtttcaaattgctgtatgctgctcgaactaaa
aattttagacggatgtga
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integrated database retrieval system
