Schizosaccharomyces pombe (fission yeast): 2541620
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Entry
2541620 CDS
T00076
Symbol
rqh1, SPOM_SPAC2G11.12
Name
(RefSeq) RecQ type DNA helicase Rqh1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03440
Homologous recombination
spo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
2541620 (rqh1)
03460 Fanconi anemia pathway
2541620 (rqh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
2541620 (rqh1)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2541620 (rqh1)
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
2541620 (rqh1)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
2541620 (rqh1)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
2541620 (rqh1)
Bloom's syndrome complex (BTR)
2541620 (rqh1)
FA (Fanconi anemia) pathway
2541620 (rqh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
2541620
NCBI-ProteinID:
NP_593092
UniProt:
Q09811
LinkDB
All DBs
Position
I:832027..836013
Genome browser
AA seq
1328 aa
AA seq
DB search
MTVTKTNLNRHLDWFFRESPQKIENVTSPIKTLDFVKVKVSSSDIVVKDSIPHKSKNVFD
DFDDGYAIDLTEEHQSSSLNNLKWKDVEGPNILKPIKKIAVPASESEEDFDDVDEEMLRA
AEMEVFQSCQPLAVNTADTTVSHSTSSSNVPRSLNKIHDPSRFIKDNDVENRIHVSSASK
VASISNTSKPNPIVSENPISATSVSIEIPIKPKELSNNLPFPRLNNNNTNNNNDNNAIEK
RDSASPTPSSVSSQISIDFSTWPHQNLLQYLDILRDEKSEISDRIIEVMERYPFSSRFKE
WIPKRDILSQKISSVLEVLSNNNNSNNNNGNNGTVPNAKTFFTPPSSITQQVPFPSTIIP
ESTVKENSTRPYVNSHLVANDKITATPFHSEAVVSPLQSNIRNSDIAEFDEFDIDDADFT
FNTTDPINDESGASSDVVVIDDEEDDIENRPLNQALKASKAAVSNASLLQSSSLDRPLLG
EMKDKNHKVLMPSLDDPMLSYPWSKEVLGCLKHKFHLKGFRKNQLEAINGTLSGKDVFIL
MPTGGGKSLCYQLPAVIEGGASRGVTLVISPLLSLMQDQLDHLRKLNIPSLPLSGEQPAD
ERRQVISFLMAKNVLVKLLYVTPEGLASNGAITRVLKSLYERKLLARIVIDEAHCVSHWG
HDFRPDYKQLGLLRDRYQGIPFMALTATANEIVKKDIINTLRMENCLELKSSFNRPNLFY
EIKPKKDLYTELYRFISNGHLHESGIIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKV
ERQRIQNEWQSGSYKIIVATIAFGMGVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKP
AHCIMFYSYKDHVTFQKLIMSGDGDAETKERQRQMLRQVIQFCENKTDCRRKQVLAYFGE
NFDKVHCRKGCDICCEEATYIKQDMTEFSLQAIKLLKSISGKATLLQLMDIFRGSKSAKI
VENGWDRLEGAGVGKLLNRGDSERLFHHLVSEGVFVEKVEANRRGFVSAYVVPGRQTIIN
SVLAGKRRIILDVKESSSKPDTSSRSLSRSKTLPALREYQLKSTTASVDCSIGTREVDEI
YDSQMPPVKPSLIHSRNKIDLEELSGQKFMSEYEIDVMTRCLKDLKLLRSNLMAIDDSRV
SSYFTDSVLLSMAKKLPRNVKELKEIHGVSNEKAVNLGPKFLQVIQKFIDEKEQNLEGTE
LDPSLQSLDTDYPIDTNALSLDHEQGFSDDSDSVYEPSSPIEEGDEEVDGQRKDILNFMN
SQSLTQTGSVPKRKSTSYTRPSKSYRHKRGSTSYSRKRKYSTSQKDSRKTSKSANTSFIH
PMVKQNYR
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaacgaaaacaaaccttaatcgtcatctagattggttttttcgtgaaagccct
caaaaaatcgaaaatgtcactagccccattaaaacattggacttcgtaaaagttaaagta
tcttcttctgatatcgtggtaaaggattcaatacctcataagagcaagaacgtgtttgat
gactttgatgatggttatgctattgatttaacagaagagcatcaaagctcttcattgaat
aatttaaaatggaaagatgttgaaggacccaatatcctgaaaccaatcaaaaaaattgca
gttccagcttctgaaagcgaagaagattttgatgatgtggatgaagaaatgttaagagca
gctgagatggaggtttttcaaagttgccaaccattggccgttaatactgctgatactacc
gtttcgcactcaacatctagctcaaacgtccctcgttccctaaacaaaatacatgatcct
tccagatttatcaaagataacgacgttgaaaataggattcacgttagtagtgcttcaaaa
gttgcaagtatcagcaatacctctaaacctaacccaatcgtcagcgaaaatccaatttct
gcaacttcggtatccatcgaaatccctatcaaaccaaaagagctatctaataacttacca
ttccctcgtttgaataacaacaacactaataataataatgataataatgctatagagaag
agggattccgcttcgcctacacctagcagtgtctcgtcacaaatttcaattgattttagt
acatggcctcatcaaaatttattgcaatatctggatatattacgtgatgaaaagagtgaa
atcagtgatagaattatagaggttatggaaagatatcctttttcttcgcgattcaaagag
tggattcctaagcgggatattttatctcaaaaaatttcttcagtacttgaagtgctgtcc
aacaacaataatagtaataataataatggaaataatggtacggttcctaatgctaaaact
ttttttactcctccttcctcgattacccaacaggtgccattcccttctacaataattccg
gagtctaccgtgaaagaaaatagcactcggccatatgttaattcacatcttgttgcaaat
gataaaataacagccactccttttcattcggaagcagttgtctctcctttgcaaagtaat
attcgcaattctgatattgctgaatttgatgaattcgacatcgacgatgccgattttacc
tttaatacaacggatccgattaatgatgagtcaggtgcctcaagtgatgttgttgtgatc
gatgatgaagaagatgatattgaaaatagacctttaaaccaagctttgaaagccagtaaa
gctgcagtttccaatgcttcacttcttcaatccagttcgcttgataggccgttacttggt
gaaatgaaggataaaaaccataaagttttgatgccatctttagatgatcccatgctttcg
tatccttggtcaaaagaagtcttaggttgcttgaaacataagtttcatctgaaaggattt
cgtaaaaaccaacttgaagcaattaatggaacgctttctggtaaagatgtattcattttg
atgcctactggaggaggtaaaagtttatgttaccagcttcctgcagttatcgaaggcgga
gcatcgcgaggagtcacactcgttatatctcctcttctttctttaatgcaagatcaactt
gatcacttaagaaaactaaatataccttcgctaccgcttagtggtgagcagcctgctgat
gaaagaagacaggtcatttcgtttcttatggctaaaaacgtgttggtaaagctcctttat
gtaacgcctgagggattagctagtaatggggcgattacaagggtattaaaaagcttatat
gaaaggaaacttttggctagaattgtgattgacgaagctcactgcgtcagtcactggggc
catgattttcgaccagattataagcaattgggcttactcagagatcgataccaaggtatt
ccttttatggcgttgacagccactgcaaatgaaattgtcaaaaaagatatcattaacacc
ttgagaatggagaactgcttggaattaaagtctagttttaatagacctaatcttttttac
gaaatcaagcccaaaaaagatctttacaccgagttatatcgcttcattagcaacggtcat
cttcacgaatctggtattatttattgcttatctagaactagttgcgaacaagtggcagcc
aaacttcgaaatgactatggtttgaaagcatggcattatcacgctggtcttgaaaaagtt
gaaaggcagagaattcagaatgaatggcaatctggtagctataaaataattgtcgcaaca
attgcatttggtatgggagttgacaaaggcgacgttcgctttgtaatccaccacagtttt
ccgaaatccttggaaggctattatcaagaaactgggcgcgctggtcgtgatggaaaacct
gcgcattgtattatgttttatagctataaggaccacgttacatttcaaaagctgataatg
agcggagacggagatgctgagactaaagaaagacagcgtcaaatgcttagacaagttatt
cagttttgcgaaaacaaaactgactgcaggagaaagcaagtccttgcttatttcggtgaa
aactttgataaagtgcactgcagaaaaggatgcgacatttgctgcgaagaagcaacatac
attaaacaggatatgaccgaattttcactgcaagcaattaagttattgaaaagtatttct
gggaaagcaactcttcttcaattgatggatatttttcgaggcagtaaaagtgccaaaatt
gtggagaatggatgggaccgtttggaaggcgcaggagtgggtaagcttttaaatcgtgga
gatagtgaacgtttatttcatcatctcgtttctgaaggtgtatttgttgagaaagttgag
gcaaaccgtcgaggatttgtctcagcttacgttgttcccggcagacaaacaatcattaat
tctgtacttgctggcaaacgcaggataattttggatgtcaaagagtcatcttcaaagccg
gacacgtctagtcgctcactttcacgtagtaaaacgctgcctgctcttcgagaatatcag
ttgaaatctactactgcatctgttgattgttccattggaacacgtgaagtagatgaaatt
tatgattctcaaatgccaccggtgaaaccctcattaattcactcaagaaacaagattgac
ttagaagagctttcaggacagaaatttatgagcgaatatgagatagatgttatgactcgc
tgtctaaaagaccttaaacttttaagaagcaacttaatggccatagatgacagcagagtg
tcttcgtatttcacagattccgtattactaagtatggccaaaaagcttcccaggaatgta
aaggaattaaaggaaatacacggtgtaagtaatgaaaaagctgtaaatttagggcctaaa
tttttacaagtgattcaaaaattcattgacgagaaagaacaaaatctcgagggaacagag
cttgacccttctctgcaatctctggatactgattacccgattgacaccaatgctctaagt
ttagaccatgagcaagggttttctgatgatagcgacagtgtttacgaaccttctagtcct
attgaagaaggggatgaagaagtggatggtcaacggaaagacattttaaattttatgaat
tctcaatctttaacgcaaactggctcagttcctaagcgtaaatcaacatcatatactcga
ccctctaaatcatatcgccataagcgtggtagtacaagttatagtcgaaaaagaaagtat
tcgacttcacaaaaagactctcgaaaaacttctaaaagtgccaacacatcattcatacat
cccatggttaagcaaaattatcgttaa
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