Schizosaccharomyces pombe (fission yeast): 2541630
Help
Entry
2541630 CDS
T00076
Symbol
hca4, SPOM_SPAC1093.05
Name
(RefSeq) ATP-dependent RNA helicase Hca4
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2541630 (hca4)
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
2541630 (hca4)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
90S particles
Helicases
2541630 (hca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
2541630
NCBI-ProteinID:
NP_594652
PomBase:
SPAC1093.05
SPAC1093.05.1
UniProt:
Q9UTP9
LinkDB
All DBs
Position
I:4619693..4621900
Genome browser
AA seq
735 aa
AA seq
DB search
MPKNRTGRSREAREKKRKEEEEEIEELNSQIEALSETVDHFAELPLTQPTKSALKNAHFI
TLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIVPLIENLYRKKWTSLDGLGALVISPT
RELAIQTFETLVKIGRLHSFSAGLIIGGNNYKEEKERLSRMNILVCTPGRLLQHIDQAVN
FDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTMLFSATQTKSVKDLARLSLQN
PDFISVHENDTSSTPSNLNQFYLTVPLTEKLDILFGFIRTHLKFKTIVFLSSCKQVRFVY
ETFRRMRPGISLLHLHGKQKQTTRTEVTAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQL
DAPEDVDTYIHRVGRTARYNRSGNALLLLLPSEEAFLKRLESKKIAVERINVKDGKKTSI
RNQLQNLCFKDNDIKYIGQKAFISYLRSIYLQKDKDVFQLDKLPVEAFADSLGLPGTPKI
TFGKLKNHSQSQKDYNSSTSLDSSEESEVDVENKQNVRTKYDRIFERKNQDVLAAHRQRL
VEVNSDEDDGDFLQVKRVDHDLPEETGERFNANSKRKEKMASSKKAMLKYKKSADKVYFD
DEGNAIPFYAMNTEDTFQKAGDPAALIASHLAEERKALEKADITDKETVRQKQLEKKRRR
QELERITQQDATPDEYVPEGPIVAFVDDELPETSKKQKKWFEDNDERDHGGIVEVENLNS
LEDQEALALKLMGAA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaatcgtactggaaggagtagagaagcccgtgaaaaaaagagaaaagaagaa
gaagaagaaattgaagaacttaactctcaaattgaagcactttctgaaactgttgatcat
tttgcagagttacctcttactcaacctacaaaaagtgcattgaaaaatgcacattttata
acactaactgagattcaaaaacaatgtattccttcagcacttaagggccgtgatatttta
ggtgctgcgaaaacaggaagtggaaaaaccttagcctttatcgtccctttgattgaaaat
ttatatcgaaaaaaatggacctctcttgatggtttgggagcattggtcatttcgcctacg
agagaattggcaattcagacattcgaaacgttggtaaaaataggccgtctacattccttt
tcggctggtctgattattggaggaaataattataaagaagaaaaagaacgtctttctcgt
atgaatatccttgtctgtacacctgggagattgttacaacacattgatcaagctgtaaat
tttgatacttcaggtttacaaatgttgatattagacgaagctgatagaatccttgatatg
ggatttcgcactacgctagatgccattgtttccagccttcctgttcatcgtcagactatg
ctgttttctgccactcagacaaaatctgttaaagacttggctaggttgtcgcttcaaaat
cctgatttcatttcagttcacgaaaatgatacatcgagtacccctagtaacctcaaccag
ttttatcttactgttccattaaccgagaaactggatattctgtttggtttcattcgtacg
catctaaagtttaagacaattgttttcttgtcttcttgtaagcaagtccgttttgtgtat
gaaacttttcggcgcatgcgacccggtatttcacttttacatttgcacggaaaacagaag
caaacaactagaacggaggttactgctaagtttacatcttctcgtcacgttgttttgttc
tgcaccgacattgtcgctcgtggattggatttcccagctgtagattgggttattcaattg
gatgcgcctgaagatgttgatacttatattcatagagttggacgtacagctcgttataat
agaagcggaaatgctctattgcttctacttccttccgaagaagcttttttgaagcgtctg
gaatcgaaaaaaatagctgttgaaagaattaatgttaaagatgggaagaaaactagcatt
cgtaatcaattacaaaacctttgttttaaagataatgacataaagtacatcggtcaaaaa
gccttcatctcttatcttcgctctatttatcttcagaaagataaagatgtgtttcaactt
gacaaacttcctgttgaagcatttgctgattctcttggtttgcccgggactccaaaaatc
acgtttggtaaattgaaaaatcattctcaatctcagaaagactacaactcctccacttct
ttagattcatcagaagaatctgaggttgatgttgaaaataaacagaatgtgcgtaccaaa
tatgatcgtatttttgaaagaaaaaatcaagacgttttagctgctcataggcaaaggctt
gtggaggtcaactcagacgaagatgacggtgacttcctgcaagtgaagcgtgttgatcat
gacttaccagaggaaactggagagaggtttaatgcaaattcaaaaagaaaagagaaaatg
gcgtcatctaagaaggctatgcttaagtataaaaagagcgcagataaagtttactttgac
gatgaagggaacgcaattcccttctatgccatgaatactgaggatacttttcaaaaagct
ggtgatcctgctgctttgattgcttcacatctggcagaagaacgtaaagctttagaaaag
gctgacattactgataaggaaacagtccgtcagaagcagttggaaaagaagcgaagacgc
caagaacttgaaagaataactcaacaagatgcgactcctgatgagtacgtaccggagggg
cctattgtcgctttcgtggatgacgaacttcctgaaacatctaaaaagcaaaagaagtgg
tttgaggacaatgatgaacgagaccatggaggcattgttgaagttgaaaacttgaattcc
ttagaagatcaagaagcacttgctctaaagttgatgggcgcagcttag
DBGET
integrated database retrieval system
