Schizosaccharomyces pombe (fission yeast): 2541638
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Entry
2541638 CDS
T00076
Symbol
pol4, SPOM_SPAC2F7.06C
Name
(RefSeq) DNA polymerase X family
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
2541638 (pol4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spo03400
]
2541638 (pol4)
Enzymes [BR:
spo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
2541638 (pol4)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
2541638 (pol4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
DNA_pol_B_palm
Motif
Other DBs
NCBI-GeneID:
2541638
NCBI-ProteinID:
NP_592977
PomBase:
SPAC2F7.06c
SPAC2F7.06c.1
UniProt:
Q09693
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Position
I:complement(542037..543557)
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AA seq
506 aa
AA seq
DB search
MKILASSTNYVLHNRLSNSQYEDARSKIVNFGGEFTNDAAKADYIFVNYSQINRVRRELR
TIGTPLETCVSCKLIVKIDWLNEPKESLTPGNPYVIWHRKPEMKVGSPYTPSTRPASHTE
APNDFENHETPNTENNNEVKSIDNVDQEGSVYPTTKEYPYVLEIPRYACQRKTPLKCVNQ
AFVNALSVLKTCREVNGESVRTRAYGMAIATIKAFPLPIDSAEQLEKMPGCGPKIVHLWK
EFASTGTLKEAEEFQKDPASKILLLFYNIFGVGASHAAEWYQKGWRTIEQVRKHKDSFTK
QIKVGLEFYEDFCKTVTIEEATEIYETIVSRMPDGIKIQSCLVGGFRRGKPVGADVDMVL
SPSHTHSTKHLVDVLLRILDEEFQFRLISVQEHSCGGKKGYVMLAVILSNSSKINRRVDI
IVVPPAYIGSAVLGWSGGIFFLRDLKLYANSHLGLSYDSFEIINLKTGKDICPDEFNEWK
DPVEAEKDIFRYFSLEYIEPKFRNTG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttgcaagcagtacaaattatgtactacataatcgcttgtccaattcacaa
tatgaagatgcgcgatcaaaaattgtaaattttggaggagaattcacaaacgatgcagca
aaagcggattacatttttgtcaattacagtcaaattaacagagttcggcgagagctaaga
acaattggaacaccgttagagacgtgtgtatcgtgtaagttgattgttaaaattgactgg
cttaacgagcctaaagaatctttaacgcccgggaatccatatgtgatatggcatcgaaaa
ccagagatgaaagttggctcgccgtacacaccttcaacaagacctgcttcgcacactgaa
gcaccaaacgattttgaaaaccacgaaactccaaacacagaaaataataacgaagttaaa
agcattgacaatgttgatcaagaaggatcagtttatccgactacgaaagaatacccttac
gttcttgaaattccacggtatgcgtgccagagaaagacaccgcttaaatgtgtcaatcaa
gcctttgtgaatgctttaagtgtcttgaaaacatgcagagaagtaaacggtgaatcagta
aggactagggcatacggaatggcgattgcaaccattaaagcttttcccttgcctatcgat
agcgcagaacaattagagaaaatgcccggttgtgggcccaaaatagtacatctttggaaa
gagtttgcatcaacgggaaccttaaaagaagctgaggaatttcagaaggatccggcttca
aaaattttgcttttattttacaatattttcggagttggtgcttctcatgctgctgaatgg
taccaaaagggttggcgtacgattgaacaagttaggaagcacaaagattcatttaccaaa
caaataaaagttggtctggagttttatgaagatttttgtaaaactgtaaccattgaggaa
gccacggagatttatgaaactattgtctcacggatgccggatggaattaaaattcagtct
tgtctagtaggtggatttcgtcggggaaagcctgttggagcggacgttgatatggtgttg
agtccatcacatactcattctacaaaacatctggtggatgttctcttaagaattttagac
gaggaatttcaattccgactaatttctgttcaggaacattcttgcggaggaaagaaaggt
tatgtaatgctagcagtcattttgtcaaattcttctaaaatcaataggcgtgttgatatt
atagtagtgccgcctgcatacataggctctgccgtattaggatggagtggaggaatattt
tttcttcgcgatttgaagctttatgctaactctcatttgggtctaagctatgattcgttc
gaaatcataaatcttaaaacaggaaaagacatatgtcccgacgaatttaatgagtggaag
gatcccgtggaagctgaaaaagacatttttagatatttctccctagagtatattgaacca
aagtttcgtaacacgggatag
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