Schizosaccharomyces pombe (fission yeast): 2541804
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Entry
2541804 CDS
T00076
Symbol
prw1, SPOM_SPAC29A4.18
Name
(RefSeq) histone chaperone, Clr6 and Rpd3L complex subunit Prw1
KO
K10752
histone-binding protein RBBP4
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03082
ATP-dependent chromatin remodeling
spo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
2541804 (prw1)
03083 Polycomb repressive complex
2541804 (prw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spo03036
]
2541804 (prw1)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
2541804 (prw1)
Histone modification proteins
HAT complexes
HATB complex
2541804 (prw1)
HDAC complexes
Sin3A-HDAC complex
2541804 (prw1)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
2541804 (prw1)
PRC2.2
2541804 (prw1)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
2541804 (prw1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
2541804 (prw1)
Chromatin remodeling factors
NuRD complex
2541804 (prw1)
NuRF complex
2541804 (prw1)
NuRF complex (fruit fly)
2541804 (prw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EIPR1
WD40_Prp19
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD_LRWD1
MIOS_WD40
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
2541804
NCBI-ProteinID:
NP_594864
PomBase:
SPAC29A4.18
SPAC29A4.18.1
UniProt:
O14021
Structure
PDB
PDBj
LinkDB
All DBs
Position
I:complement(join(5110432..5111536,5111614..5111719,5111790..5111874))
Genome browser
AA seq
431 aa
AA seq
DB search
MAVSAVPHPSKQAQASEEGINQEKCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYP
EQQIFAEHGYTEQKMFLGVRADVGKYLLAVASIQLPYLNQTVPPTTMEGASAGDESSLRV
NISNLYSHPESVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRL
TKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDV
RFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATC
STDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGE
DQPAEEAQDGPPELLFMHGGHTSCTIDMDWCPNYNWTMATAAEDNILQIWTPSRSIWGNE
QLEEDATAYLS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatcagctgttccccatccttccaagcaagcgcaggcttcggaggagggaata
aatcaagaaaaatgcatcaatgaagagtataaaatttggaaaaagaactcaccgttcctt
tacgatttaataattactagagctttggaatggccttgtatgtcactacaatggtatcca
gagcagcaaatttttgcagaacatggatatactgagcagaaaatgtttctgggagttcgt
gctgatgttggcaaatacttactagctgttgcgtctattcaattaccctatttaaatcag
actgttcctcctactacaatggagggagcatctgcgggtgacgagtcttctctacgtgtt
aatatctcaaatctttattctcatcctgagtctgtttgtagtgcgaagcttatgccacaa
gacgattcttgtgtagctacggtgggtaactatcataatgatgtgttggtttttgacaag
gaatccttcgaatcttatagctcggctagtgagtctcctcttaagcccaaatatagattg
accaaacatacccagccctgtactagtgtttgttggaattttctttctaagggtactttg
gtttctggatcgcaagacgctactctttcttgttgggatttgaatgcttacaacgagtca
gattcagcgtcagttttgaaagtgcatataagcagccatgaaaaacaggtcagtgatgta
cgctttcattataagcaccaggatcttcttgcttcagtttcctatgatcagtaccttcat
gttcatgatattcgtcgccctgatgcttccacaaagccagctcgaagtgtgcatgcccat
agcggtcctattcattctgttgctttcaaccctcataacgactttattttggctacttgt
tcgactgacaaaaccattgcactttgggatttacggaaccttaatcaacgcttacataca
ttagaaggacatgaagacattgtaacaaaaattagcttttctcctcatgaagagcctatt
cttgcttctacctcagccgatagaaggaccttagtttgggatctttcaagaatcggggaa
gatcagcctgctgaggaagctcaagacggtcctccggagcttctttttatgcacggaggc
catacttcttgtacaattgacatggattggtgtcctaattataattggacaatggcaacc
gctgctgaagataatattcttcaaatttggacaccttctcgctcaatttggggtaatgaa
caattagaggaagatgctacggcatatttaagttaa
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