Schizosaccharomyces pombe (fission yeast): 2541908
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Entry
2541908 CDS
T00076
Symbol
rfc2, SPOM_SPAC23D3.02
Name
(RefSeq) DNA replication factor C complex subunit Rfc2
KO
K10755
replication factor C subunit 2/4
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03030
DNA replication
spo03410
Base excision repair
spo03420
Nucleotide excision repair
spo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
2541908 (rfc2)
03410 Base excision repair
2541908 (rfc2)
03420 Nucleotide excision repair
2541908 (rfc2)
03430 Mismatch repair
2541908 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
2541908 (rfc2)
03036 Chromosome and associated proteins [BR:
spo03036
]
2541908 (rfc2)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2541908 (rfc2)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
2541908 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
2541908 (rfc2)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
2541908 (rfc2)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
2541908 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
2541908 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_22
DUF815
RuvB_N
AAA_24
AAA_16
AAA_7
AAA_5
AAA_11
SLFN-g3_helicase
Mg_chelatase
AAA_19
AAA_30
AAA_28
AAA_3
ResIII
Motif
Other DBs
NCBI-GeneID:
2541908
NCBI-ProteinID:
NP_594540
PomBase:
SPAC23D3.02
SPAC23D3.02.1
UniProt:
Q09843
LinkDB
All DBs
Position
I:join(4338742..4338815,4338868..4339816)
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AA seq
340 aa
AA seq
DB search
MSFFAPRNKKTEQEAKKSIPWVELYRPKTLDQVSSQESTVQVLKKTLLSNNLPHMLFYGS
PGTGKTSTILALSRELFGPQLMKSRVLELNASDERGISIIREKVKSFAKTTVTNKVDGYP
CPPFKIIILDEADSMTQDAQAALRRTMESYARITRFCLICNYMTRIIDPLSSRCSKYRFK
PLDNENMVKRLEFIAADQAVSMEPGVVNALVECSGGDMRKAITFLQSAANLHQGTPITIS
SVEELAGAVPYNIIRSLLDTAYTKNVSNIETLSRDVAAEGYSTGIILSQLHDVLLKEETL
SSPVKYKIFMKLSEVDKRLNDGADETLQLLDLLSSISVVC
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctttgctccaaggaataagaaaacggagcaggaagcaaagaaatcaatacct
tgggttgagctttatcgtcccaagacattggaccaagtttcctctcaagaatctactgta
caagtattaaaaaaaacacttttatctaataacttacctcacatgttgttttatggctct
cctggtactggaaagacgtcaaccattctagctttgtctcgtgagctatttggaccgcaa
ttgatgaaatcaagggttttggaattgaatgcttctgatgaacgcggtatctctattatt
cgggagaaagtcaagtcttttgcaaaaacaaccgtaaccaacaaagtcgacggttatcct
tgtcctccttttaaaattataattttggatgaggcagattctatgactcaggatgctcag
gctgctcttcgacgaactatggagtcgtatgccaggatcactaggttttgcctgatctgt
aactacatgaccaggattattgatcctcttagcagtcgctgtagcaagtatcgatttaaa
ccgttagacaacgaaaacatggttaaaagattagaatttatagctgctgaccaagctgtt
agcatggagcctggagttgtcaatgcattggtagaatgctctggcggtgatatgcgaaag
gccattacttttcttcagagtgctgcaaatcttcatcagggtacgccaatcactatttcc
agtgtagaggaattagcgggagctgtaccatataacattatacgctctttattagacaca
gcatataccaaaaatgtatctaacattgaaactttatctcgtgatgttgctgcggaagga
tattcgacaggaataatattatcccaattacacgatgtgctattaaaagaagagacatta
agcagcccagtaaagtacaaaatattcatgaaactttctgaggttgataagcgtctaaat
gatggagccgatgaaactctacaattactggatttactttcttctatttcagttgtgtgc
tag
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