Schizosaccharomyces pombe (fission yeast): 2541917
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Entry
2541917 CDS
T00076
Symbol
trm402, SPOM_SPAC23C4.17
Name
(RefSeq) tRNA (cytosine-5-)-methyltransferase
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spo03016
]
2541917 (trm402)
Enzymes [BR:
spo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
2541917 (trm402)
Transfer RNA biogenesis [BR:
spo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
2541917 (trm402)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
DUF7514
Motif
Other DBs
NCBI-GeneID:
2541917
NCBI-ProteinID:
NP_593189
PomBase:
SPAC23C4.17
SPAC23C4.17.1
UniProt:
O13935
LinkDB
All DBs
Position
I:join(1058395..1058415,1058465..1058514,1058623..1059777,1059838..1060104,1060143..1060670,1060709..1060745)
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AA seq
685 aa
AA seq
DB search
MGKRNKKVTQGKRAYNDKSEIVLENKQFEGYYKKQNLFRGKPNDEFDSFMEYMRKPLPTT
FRICGYRHHAFELKNHFEKYYVPSLKNVVHEGQTIPPPTVLPWYPDGLAYIVDAQKDVIR
KSPPLKRLQRFLVSENEAGNINRQEAVSMLPPLFLDVEPHHVILDMCAAPGSKTAQLIEA
VYKKANIKDAAHDSKNLKSVEGLVIANDADPKRAQMLVHQINRLNSPNILVVNHDASTMP
NIYVKGSSPSDGLNVIEEKKILKFDRILADVPCSGDGTFRKNLSLWREWSANSAFSLHPL
QLRILIRGLQLLKVGGCLVYSTCSINPIENEAVVTAALKATGGAVSLVDVSKKLPLLKRD
PGLLSWKVLDDSLNEFQSPAENTNDKIELTESMWPLPEEEMSKLHIERCARLYPHMQNTG
GFFVAVLQKTDPINSRSFDPKKYTASMEILPPENKRQRTEKGVDEASNSTLTKSGNSYFD
EEPFVYINPDDTSIKTIVDFYGIDPSFPRDQFFVRNQSGIPVRSIYFACSLFKEIIEANT
NRVKFVHGGVRFFVKQEISQLLKDFSLKANKDICNFRIHSNGVNIISPFLNEKHFYDAGL
KDLKILVKNEYPHVEQFSESGMLKKEFEKMPLGCNILRVDAQTKDGALMDMLILQPIWRS
PTSCNLMLARKEKQNLSLELFGMDV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagaaataaaaaggtgactcagggcaaaagggcttacaatgacaaaagtgaa
attgtcttagaaaataaacaattcgaaggttactataaaaagcaaaatttatttcgagga
aagccaaatgatgagtttgatagctttatggaatatatgagaaagcccttaccaactaca
tttcgtatttgtggatatcgtcaccatgcttttgaactaaaaaaccattttgaaaaatac
tacgtaccaagccttaaaaatgtcgtccatgagggtcaaactattccacctccaacagtg
ctgccttggtacccagatggtcttgcatatattgtcgatgcgcaaaaagatgttattcga
aagagcccgcctcttaaacgacttcagcggtttcttgtaagtgaaaatgaagctggaaac
attaatcgtcaagaagcggttagcatgcttcctcctctattcttagacgttgagccacat
catgtaattctggatatgtgtgctgctccgggatctaagactgcgcagcttattgaagct
gtttataaaaaagccaatatcaaggatgctgctcatgacagcaaaaatctcaagagtgtt
gaaggtcttgtaattgctaatgacgctgatcccaaacgagcccaaatgcttgttcaccaa
atcaatcgtttaaattccccgaatattttggttgttaatcacgatgcatcgacaatgccc
aatatctatgtcaaaggttcatctccttctgacggcttaaatgtaattgaagaaaaaaaa
attttaaagtttgaccgtattttagccgacgtgccttgttcaggagatggcactttccgc
aaaaatttgtctctttggagggaatggagtgccaatagcgcctttagccttcaccctttg
caattgagaattttgatcagaggattgcaacttttaaaagtgggtggttgtttggtttac
tcaacatgctccattaatcccatagaaaatgaagctgttgtaacagctgcattgaaggct
actggtggtgcagtttctcttgttgatgtgtctaaaaaactacccctacttaagcgtgat
cccggtcttttatcttggaaggttttggatgattctcttaacgaatttcaatcacctgct
gagaacaccaatgataagatcgagttaaccgaatccatgtggcctcttcctgaggaggaa
atgagcaaactccacatagaaagatgtgccagactatatccccatatgcagaatactggt
ggtttttttgtggccgtactccaaaaaactgatcctattaattcccgttcgtttgatccc
aaaaagtatactgctagtatggaaattctaccacccgagaacaagagacaaaggacggaa
aagggtgttgacgaagcttctaattctacattaactaaatctggcaacagttattttgat
gaagagcccttcgtatacattaatcctgatgatactagcatcaaaactattgttgatttt
tatggtatcgatcctagttttccccgtgatcaattttttgttagaaatcaaagcggtatt
cccgttagatcaatttattttgcatgttctttgttcaaagaaattattgaagccaacacg
aatcgtgtgaaattcgtgcacggcggtgttagattctttgtaaagcaggaaatcagtcaa
ctgttgaaagatttctcgctaaaagctaacaaagatatttgcaattttcgtattcatagt
aacggtgtcaatatcattagccctttcttaaacgagaagcatttttacgatgctgggtta
aaagatttaaaaattttggttaaaaacgagtacccacatgttgagcagttttctgagagc
ggaatgttaaaaaaggaatttgaaaaaatgcctctaggatgtaacatccttagagtggat
gctcaaacaaaagatggtgcactcatggatatgttaatattacagcctatctggcgaagc
cctacgagctgtaatttaatgcttgctagaaaagagaagcaaaatctttcgttggaatta
tttggaatggacgtgtaa
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