Schizosaccharomyces pombe (fission yeast): 2542005
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Entry
2542005 CDS
T00076
Symbol
rtr1, SPOM_SPAC23A1.16C
Name
(RefSeq) RNA polymerase II CTD phosphatase Rtr1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spo01009
]
2542005 (rtr1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2542005 (rtr1)
Enzymes [BR:
spo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
2542005 (rtr1)
Protein phosphatases and associated proteins [BR:
spo01009
]
HAD phosphatases
Fcp/Scp phosphatases
2542005 (rtr1)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
2542005 (rtr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Arch_fla_DE
Motif
Other DBs
NCBI-GeneID:
2542005
NCBI-ProteinID:
NP_594445
PomBase:
SPAC23A1.16c
SPAC23A1.16c.1
UniProt:
O42853
LinkDB
All DBs
Position
I:complement(4105116..4105709)
Genome browser
AA seq
197 aa
AA seq
DB search
MNKKSILKKPKNAQSTQEKQLITWSKSLIDEARSRLQYDFFALEWIEKLVDPVSLETLEE
ARKYLRKSDYDQVVKERKLVNLCGYPVCPYEPKQQTRYKLEDSGMKVYGGLNYYCSKDCF
LKSCQYMVELSDEPLWIREDAREAMKQHLDPRQDEAFRKELENKKIEDVRLLLQALPVGY
KAKVGEIVEHPLANEQS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaatcaattctcaaaaagccgaaaaatgctcaaagcactcaagaaaagcaa
ttgatcacgtggtcgaagagtcttatagatgaagcacgcagtcgacttcagtatgatttt
tttgccctcgaatggattgaaaagctggttgatccggtttccctagaaactttagaggaa
gctcgtaaataccttcgaaaaagtgattacgatcaagtggtgaaggagcgtaaactcgtc
aatctgtgcggttatcccgtttgtccttatgaacctaagcagcaaactaggtataaatta
gaagattcaggaatgaaggtctacggtggactcaactattattgctcgaaggattgcttt
ctaaaaagttgtcaatatatggttgagttgagcgacgaaccattatggatacgtgaagat
gctcgcgaagctatgaaacaacatctcgatcctcgtcaagatgaagcatttcgtaaagag
ttggaaaacaaaaaaattgaagatgtacgcttactcctgcaagcgttgcctgtgggttat
aaggcaaaagttggtgaaatcgttgaacatcctttggctaatgaacaatcataa
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