Schizosaccharomyces pombe (fission yeast): 2542023
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Entry
2542023 CDS
T00076
Symbol
ufd2, SPOM_SPAC20H4.10
Name
(RefSeq) ubiquitin-protein ligase E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04120
Ubiquitin mediated proteolysis
spo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
2542023 (ufd2)
04120 Ubiquitin mediated proteolysis
2542023 (ufd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spo04121
]
2542023 (ufd2)
Enzymes [BR:
spo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
2542023 (ufd2)
Ubiquitin system [BR:
spo04121
]
Ubiquitin ligases (E3)
U-box type E3
2542023 (ufd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
OGFr_N
Motif
Other DBs
NCBI-GeneID:
2542023
NCBI-ProteinID:
NP_593630
PomBase:
SPAC20H4.10
SPAC20H4.10.1
UniProt:
Q9HE05
LinkDB
All DBs
Position
I:join(2128463..2128480,2128523..2129266,2129313..2131509,2131550..2131623)
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AA seq
1010 aa
AA seq
DB search
MSDLEKIRLKRLAKLQQTNSEANSSKEPKESNIAPEPKKPDLKKRFIGSKATTSNSEQKE
ISPPVTSGAPKHRLFSKDEWMHFITCQALNITLSETDSSKYYLEGFKKDLEEEGSPLLFN
ENNVDSALLSRLSTTGNNTFSYLLQSWSFLYQYKKRLPKDENQDFKIHYLSLLKSLLVSY
AGIVVMLPDTFNSETIDLAEVLIGAEGIPLEFLSEFVQRFEHENLDELFIPVLESLSLKI
GLMNVDTVQMNVMQIILQLVSLKPIALLLPKLPSWNPTNNAGEIEYKTFLGRISSLSVFT
QDVASRYFSNSTERSAQNISSSISSLKLTMSTYQDVLFQIFNTLIRTSTSLRESVLDFFA
MVVNANHKRQSIQVNHFDITSDACMLNFSHVLSRLSEPFLDIGCSKIDRVQVEYFRRNPR
VDIKEETKLNADQKASESFYSKPAEGSNNFISDIFFLNLAFHHYGVNATFKALEQLVQSI
RDSEKLKERLETEQQNMSGSFQATRLTAQLSRLDQRLDLDRSFVHCYEIMLTQTSDTSRS
FSFLNFVAIWLSRLADGQSSTYPKMPLSLPFNENAPEAFKCLPEYFIETITDYMLSLFKT
SSSTLTLHSLEPLCEFCVSFLTQANYIKNPYLRAKLAEILYFGVQTHVGRSELLLDVVRT
SKVATRWLLPALMAFYIEIESTGQSTQFYDKFNIRFYICEVFRTIWKQPAYFGKLEQEQK
TNLPFFVKFVALMLNDATYLLDEALLKLTEIHNLQSLLADAISNSNSNQNVQESQSNLAA
AERQASTYCQLGNETIFMLKLFTSSIPKAFCAVEIVDRLAAMLNYNLQALCGPKCSNLKV
EDPTKYHFNAKTLLSIIFDVYLNLCNEPAFVEAVAHDGRSYSKEIFERATSIMTKHNLKS
SFDIEAIKEFVNRVEAFRLQEATEEEDMGDIPDYFLDPLMFTIMKDPVVLPRSGISIDRS
TIKAHLLSDATDPFNRTPLTLDDVTPNDTLREEINTFLKSKRNKHSRNSE
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttggaaaagattcgtcttaaaaggcttgctaaattgcagcagaccaattcg
gaggcaaattcttctaaagaacctaaggaaagcaatattgcacctgaacctaaaaaacct
gatttaaaaaagagatttattggttcaaaggctacaacatcaaattcagaacaaaaagaa
atatctccacctgttacatctggtgctccaaaacatcgcttgttttctaaggatgaatgg
atgcattttataacatgtcaggctcttaatattacattaagtgaaactgattcatcaaaa
tactatttagaaggttttaaaaaagatttagaagaagagggatcccctttattatttaat
gagaataatgttgactctgcgttactctctcgactgtcaacaactggcaacaatactttc
tcttatttgttacagtcttggagttttctgtatcagtataaaaagagacttccgaaggat
gaaaaccaggactttaaaattcactatttatctctgttaaaaagtttgcttgtcagttat
gccggtattgtagtaatgcttcctgacacattcaattcggagacaattgatttggccgag
gttttaattggtgcagaaggtatacctttggaatttctatcagaatttgttcagaggttt
gaacacgaaaacttagatgaattgtttattcctgtgttggaatctttatctttgaaaatt
ggtcttatgaatgtagatactgttcaaatgaatgtgatgcagattatattacaacttgtg
tcattaaaaccaattgcattacttttgccgaagttgccttcttggaatcctacgaataat
gctggagaaattgagtacaaaacgtttcttggaagaatatcaagcttgtcagtgtttact
caagatgtcgcttctcgatatttttccaattctactgagagatcagcccaaaatatatct
tcgtcaataagttctttaaaattgactatgtctacttatcaggatgtcctttttcaaatt
ttcaataccctcattcgaacatctacatctttgagagagtctgtgttggatttctttgcc
atggtggtaaatgccaatcacaagcgacaatccattcaagttaatcattttgatattaca
tctgacgcctgcatgctaaatttttcacatgtgttaagcagactttctgaaccatttctt
gacataggatgttcgaaaattgacagagtacaagttgaatattttaggagaaaccctcgc
gttgatatcaaagaagagactaaattgaatgctgatcaaaaggcttcggaatcgttttat
tcaaaaccagccgagggttccaataactttatttcagacatattttttttaaatctcgca
tttcatcattatggtgtaaatgctacctttaaggctttagagcaacttgtgcaatcaatt
cgtgatagcgagaaactgaaagaaagattagagactgaacagcaaaatatgagcggtagt
tttcaagcgacacgtctcactgctcaattaagtcggcttgatcaaagattggatttagat
agatcgtttgtgcactgttatgagattatgcttacgcagacatctgatacttcaagatca
ttttcttttcttaatttcgttgccatttggttatcgaggttagctgatggtcaatcttcg
acatatccaaaaatgccgctatcgttaccgtttaatgaaaatgcaccggaagctttcaaa
tgtttacctgaatattttattgaaaccattacagattatatgttgtctttatttaaaacc
tcgtcgagtactttgacgctgcattccttagagcctttgtgtgaattttgtgtgtcgttt
ctaactcaagctaattatatcaaaaatccttatttgcgagcgaaacttgccgagatttta
tactttggagtgcaaacgcacgtgggaagatcagaattgttgttagatgttgtacgtacg
tcgaaggttgcaacaaggtggttacttccagcacttatggcgttttatattgagattgaa
tctacaggacaatctacccaattttatgataaattcaacattcgtttctatatatgcgaa
gtatttagaactatttggaagcaaccagcctattttggtaagctggagcaggagcaaaaa
acaaatttgccgttttttgttaaatttgtagctctcatgcttaatgatgctacatatctt
cttgatgaggctcttttaaaactaaccgagattcacaaccttcagagccttttggcagat
gcaataagcaatagcaactctaaccagaatgttcaagaatcgcaaagcaacttagcggcc
gcagaacgtcaagcttctacttattgccagttagggaatgaaactatttttatgctcaaa
ttgttcacttcctcaattcctaaagccttttgtgccgttgaaattgtagatcggttggca
gctatgctaaactataaccttcaagctttatgtggccctaagtgtagtaacctcaaggta
gaggacccaacgaaatatcattttaatgcaaaaacccttttgtcgattattttcgatgtt
tatcttaacctgtgcaatgaacctgcatttgtcgaagctgttgctcacgatggccgttct
tatagtaaagaaatatttgaacgtgcgactagcattatgactaagcacaacctcaagtca
tcttttgatatagaagctattaaagaatttgtgaatagggtagaggcattcagattgcaa
gaggctactgaagaggaagacatgggtgatattcctgactacttcttagatcctcttatg
tttacaataatgaaagatcctgttgttttaccgagatctggcatttcgattgataggtct
actattaaagcacatctactaagtgatgccaccgacccatttaatcgaactccattaacg
cttgatgatgtgacaccgaatgatacattacgtgaggaaattaacacgttcctgaaatca
aaacgcaacaaacattcgcgaaatagtgaatga
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