Schizosaccharomyces pombe (fission yeast): 2542036
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Entry
2542036 CDS
T00076
Symbol
hrq1, SPOM_SPAC23A1.19C
Name
(RefSeq) RecQ type DNA helicase Hrq1
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
2542036 (hrq1)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
WHD_HRQ1
MZB
Helicase_C
ResIII
CDT1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
2542036
NCBI-ProteinID:
NP_594448
PomBase:
SPAC23A1.19c
SPAC23A1.19c.1
UniProt:
O13983
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All DBs
Position
I:complement(join(4113815..4113933,4114109..4117181))
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AA seq
1063 aa
AA seq
DB search
MSQTPIKKEESNDQDDKFEFKKYINEGKLPLKADNPKKKPQLGTIQANQPIPSIFDNLFN
LFKVINTTYTFLYLRNSLTITFPLLNSSVKQSLKKELTIGDLSQLREICPQIIELNYKSL
ASLALEINKNVYTDLNPELYTGSTVSQSSEYVLVIELLETQERSSKRRRREGPTMKANIQ
RQKLDFNNLKKAIELRNQKFLQGIKEYIKKCQLTELDPTQQLLTQSRKNQPVPPDSPSIP
NDSIENCNLNTKACSIEELLNEIASESSYEGQIVQEALHTYPAVEAQYGALSRPLSQELI
NALYTSRNIEKTYKHQADAINHLWNGFHVIVSTSTSSGKSLIYQIPILQSLLEDNQSTAF
FVFPTKSLAQDQKKSLIDILSYMPTLKNIRVDTFDGDTPLESRESIIRSANIIFTNPDML
HQTILPNANRWYYFFKNLKLFVLDEAHVYNGIFGVHVAFVLRRMRRIAEYFGNSQYRFVS
CSATIEDPLQHMKKIFGVDNIKLINYTSSPSGSKKFVMWNPPYVDPKHPDDGKKSAISEA
SKLLIKFAEKRVRTIVFCRVRKTCESLMRLVRQELKTKQKGDLLSKIQSYRAGYTVQERR
KIESEMFNGKLYGIIATNALELGIDIGSLDAVITIGFPYSLSNLRQQFGRAGRRNKSSLA
VYIVETFPVDQFYLKHPILIHTQPNAELTLDLTNEVLLASHLQCAAYELPINIRSDEKFF
GNQIQDICEANLEMVEESYRPHPKYLPFPASQVRIRSVSEDMFTLVDVTNDKNVILELLE
PFRVALTAYEGAVYVYQGKTFIIRLLNINKRIITAHQVDVEWSTLQRDFTDVDPVRSLMK
KTMHGSTNIYFGAVKATLHVFGYFKVNKQKDILDVVDITDHPVEIDSRGFWIDVPWHIIE
VLSLKKINGAASIHAAQHALLSLMPIFISNSGNDIRTECKAGEKEYKEAKSERRRPSRLI
FYDNCGDSSGAGLCNKAYEHTDELITMAIERIESCDCKVREGCPGCITSSKFEGGVCSGE
VLDKVGALILLKMLLCQHVNLDIYADGPEIDSYHALRTLIPSC
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaactcctattaaaaaggaagaatctaatgatcaggatgataaatttgaattt
aaaaaatatattaatgaagggaagctccctctgaaagcagataatcccaaaaaaaaacca
caacttggaactattcaagctaatcagcctattccatccatatttgacaatctttttaat
ttattcaaggtaattaatactacatacacttttctttatttgagaaattctcttacaatc
acttttccccttctcaattcgagtgttaagcaaagtttgaaaaaggagttgacaatcggc
gatttatctcagctaagagaaatatgtcctcaaataattgaattaaattataaatcactt
gctagccttgcattagaaatcaataaaaatgtttacactgatctaaaccctgagttgtac
actggttcaacggtctcacagagttctgaatatgttttggttattgagcttttagaaacg
caagagagaagttccaaacgaaggagacgtgaaggcccaacaatgaaggctaatatccag
aggcaaaagctggattttaataatttgaagaaagccatagagttacgaaaccaaaagttc
cttcaagggattaaagaatatataaaaaaatgtcaattgacagaacttgacccaacgcaa
cagctattaactcaatcccggaaaaaccagccggttcctcctgattcaccgagtattcct
aatgattcaatagaaaactgcaatttaaatactaaagcgtgctcaattgaagaactttta
aatgaaatagcttctgaatcttcttacgaagggcaaatagtccaagaagctttacatact
tatcctgctgttgaagcacaatatggagcgttgtctcgacctttgtctcaagagcttata
aatgctctttatacatctagaaacatcgaaaagacatacaaacatcaggcagacgctatc
aaccacctttggaacggatttcatgttatagtgtcaacttctacatctagtggaaagtct
ttgatttaccaaattccaattttacaaagtttgttagaagataatcaatctacggcattt
tttgtattccctactaaatctttagcccaagatcagaagaagtcgttaatcgatatactt
agctatatgccgacgcttaagaatattcgagtggacaccttcgatggggatacaccactt
gagtctagagaaagtattattagatctgcaaatataatctttacgaatccggatatgtta
catcaaacgattcttcccaatgctaatcgttggtattatttctttaaaaacctgaaactt
ttcgtcctggatgaagctcatgtgtacaatggaatatttggcgttcacgttgcttttgtt
ctaagaaggatgcgccgtattgctgagtactttggaaatagtcaatatcgatttgtatca
tgctcggctactattgaggatcctttacaacatatgaaaaaaatttttggagtagataat
ataaaactaattaactatacttcttctccttctggttcaaaaaaatttgtaatgtggaat
ccaccttatgtcgaccccaagcatcctgatgatggaaagaaaagcgcaatctctgaagcc
tcgaaactgcttattaaatttgccgaaaagcgggtgcgtacaattgttttctgtcgtgtt
cgaaaaacctgtgagtcgttaatgagactagtgaggcaggaattaaaaaccaaacaaaaa
ggagatcttttatctaagattcaatcgtatagggctgggtatacggttcaggaacgcagg
aagatagagagtgaaatgtttaacgggaaattatatgggattattgcgacgaatgcttta
gagctaggtattgatataggatcactggatgccgttataaccataggatttccatattct
ttgtctaacttgcgccagcaatttggtcgtgctggtagaaggaataagtcttccttagca
gtatatatagttgagacatttcccgttgatcagttttatttaaagcatcctattttgatt
cacactcaaccaaatgctgaactcactttagacttgacaaatgaggtattactagcgagt
catcttcagtgtgctgcatatgagcttcccattaacataaggagcgacgaaaagtttttt
ggaaatcaaattcaagacatttgcgaagcaaatttagaaatggttgaagagagttatcgg
cctcatccaaaatatcttccttttcctgcctcgcaggtacggatacgaagcgttagtgaa
gacatgtttactctcgtcgatgtcacaaatgataagaatgttattctagaactcctcgaa
ccttttcgtgttgcattaactgcttacgaaggtgcagtttatgtttatcaaggaaaaacg
tttatcattaggctcctaaatattaacaagagaattattactgctcatcaagttgatgtt
gaatggtcaacattgcaaagagatttcacagatgttgatcctgttcgcagcttaatgaag
aagactatgcatggaagtacaaacatttattttggggctgttaaagcaacattacatgta
tttgggtatttcaaagttaacaagcagaaagatattctggacgtggtagatattaccgat
catcctgttgaaattgatagtcgaggtttctggatagatgtaccttggcatatcattgag
gttttgtcattaaaaaaaataaatggagccgctagtatacatgctgcccaacatgcttta
ctttcgttgatgccaatttttattagtaacagcggtaacgatattcgaacagaatgtaaa
gcgggtgaaaaggagtataaagaggctaaaagcgagcgaagacgtccttcccgactcatt
ttctatgataattgtggtgattcatctggtgctggtttatgcaacaaggcatatgaacat
actgatgaattaattacaatggccattgagcgaattgagagttgcgattgcaaagttcgt
gaaggttgtcccggatgtattacgagttcaaaatttgaaggcggagtttgctctggagaa
gtacttgacaaggttggcgctttaatcttattgaaaatgctactgtgtcaacatgtaaat
ttagatatatatgctgatggaccagagattgattcatatcacgctttgcgaactttaata
ccttcttgttaa
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