Schizosaccharomyces pombe (fission yeast): 2542071
Help
Entry
2542071 CDS
T00076
Symbol
pcf2, SPOM_SPAC26H5.03
Name
(RefSeq) CAF assembly factor complex subunit B Pcf2
KO
K10751
chromatin assembly factor 1 subunit B
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spo03036
]
2542071 (pcf2)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
2542071 (pcf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WDR55
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
2542071
NCBI-ProteinID:
NP_594450
PomBase:
SPAC26H5.03
SPAC26H5.03.1
UniProt:
O13985
Structure
PDB
PDBj
LinkDB
All DBs
Position
I:join(4119899..4120030,4120126..4120228,4120270..4120512,4120578..4121638)
Genome browser
AA seq
512 aa
AA seq
DB search
MRAEVLQIRWHYDANDDHTPIYSVDFQKNSLNKFATCGGDSKIRIWQLITSESSTKVEYL
STLSRHTQAVNVVRFNPEGNILATAGDEGTIMLWVPTNTPITTLADDAEELALAKEYWKV
KIVCRSMGSEIYDLCWSVDSNFLIAGAMDNSLRLYDAHTGQLLTQKFDHSHYVQGVCWDP
LNQYIVSESSDRSICLYEIQEEKKNPKKFQLVLKSRICRIEYNVTKFELISVTKPLNNDE
SSGISEPIETSNNNESPVSKHEALSSTANIVKDGSLERTEPPNSLNSKISYSLYCNETLV
SFFRRPAFSPDGLLLVTPAGRLRPHGQPNFEVPYTAYIYTRGSITKQPVACLNGFKKPVI
AVRFSPIHYELNSFSNFSFTSVSFNLPYRMVFAVACQDAVYIYDTQTCKPFYRAVNLHYS
NLTDIAWNDDGNVLLMTSIDGFCSVITFEPGELGVKSQHKISLPEKRSASPSSIDDSQDN
TAGGPATTTLIPRKVESSKVSKKRIAPTPVYP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagagcggaggttttgcagatacgatggcattatgatgctaatgatgatcacacacct
atttattcagttgattttcaaaagaacagtcttaataaatttgctacatgtggaggagac
agtaaaatcaggatatggcaattgatcacttcggaatcatccacaaaagtcgaatatttg
tctacgttaagtcgacacacgcaagcagtgaacgtcgttcgtttcaatccagaaggaaat
attcttgctaccgccggagatgaaggaactattatgttatgggttccaactaacactcct
ataacaactttggctgatgatgcggaagagttggctctagctaaagaatattggaaggtc
aaaatagtttgtaggtcgatgggttcagaaatatatgatttatgctggtcggttgacagt
aattttcttattgccggcgccatggataatagtcttcggttgtacgatgctcacacaggg
caactgcttactcaaaaattcgaccattcacattacgttcaaggggtatgttgggatcct
ttgaatcaatacatcgtttcggaaagtagtgatcgttctatatgtttatacgaaattcaa
gaggaaaaaaagaatccgaaaaaattccaactcgttttaaaatcgcgcatctgtcgtatt
gagtataatgtaactaaattcgaattaatatctgttacgaagcccttaaataatgatgaa
tcatcggggatatcagaacctatcgaaacttctaataataatgagtctcccgtatctaag
cacgaagctctctcatcaactgcaaacatagtcaaagatggaagcttagagcgaacagag
cctccaaattctctcaattcaaaaatcagttactctttgtactgcaatgaaactcttgtt
tctttttttcgtcgtccagcattctcccctgacggattactactagttacgcctgctggt
cggcttcgaccgcacggtcaaccaaactttgaagttccctatactgcttatatttataca
agagggagtataaccaaacagccagtagcttgtcttaatggattcaaaaaaccagttatt
gcggttcgtttttctccaattcattatgaattgaactcattctctaacttctcttttact
tctgtctcttttaatcttccttatcgaatggtatttgctgtggcatgtcaagatgctgtt
tatatttatgatacgcaaacttgcaaaccattttatcgtgcagtaaatttacattactct
aaccttacagacatagcttggaatgatgatggaaatgttttgttaatgacttctatagat
ggtttttgttctgtaattacctttgaacctggagaattgggtgtcaaaagtcaacacaaa
atttctttgccggagaaacgatcagcttcaccctctagtattgatgattcacaagacaat
acggctgggggaccagctactacaacactaattcccagaaaagttgaatcttcaaaagta
tcaaagaagcgtattgcacctacccccgtttatccataa
DBGET
integrated database retrieval system
