Schizosaccharomyces pombe (fission yeast): 2542072
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Entry
2542072 CDS
T00076
Symbol
bop1, SPOM_SPAP32A8.03C
Name
(RefSeq) ubiquitin-protein ligase E3
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2542072 (bop1)
04121 Ubiquitin system [BR:
spo04121
]
2542072 (bop1)
Enzymes [BR:
spo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
2542072 (bop1)
Membrane trafficking [BR:
spo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
2542072 (bop1)
Ubiquitin system [BR:
spo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
2542072 (bop1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-RING_Vps41
HypA
Zn_ribbon_19
Prok-RING_1
zf_RING_Vps8_fungal
FAR1_N
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
2542072
NCBI-ProteinID:
NP_594179
PomBase:
SPAP32A8.03c
SPAP32A8.03c.1
UniProt:
Q9C1X4
LinkDB
All DBs
Position
I:complement(join(3407825..3409267,3409427..3409525))
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AA seq
513 aa
AA seq
DB search
MESQPVIWYCHSCSNEFQRPGNCPRCNSDFVEMVEPNTAPEDDPRAANFVNATEFNDPNA
MLQNILQSLGQGVVPNVNPTDANRTANPNTNSNPNPNATNAQPNPTMFSTGQFSTEQGLP
NVFFGAAAAQPGSGTPFVMPGIVNAAQIRNFFQNIMGGNAPQPEANSEQARNANTETSNP
PFASAQTQGQEHRPSSPNPAEHMTGAYVNTPLNQPPSYAASTQPEFQQTTSPIFSSSSTP
PPPPPRPSQPTSGESQNTNPRFPFSAQSFVFSVGPNGALHQVNTSTENPQNAQAGAIPIT
DLGSILERIFGSLNQPGAQQGEGEPFNPANMFSNIFNLSGNPGDYAWGARGLDDIISQLM
EQAQGHNAPAPAPEDVIAKMKVQKPPKELIDEEGECTICMEMFKINDDVIQLPCKHYFHE
NCIKPWLRVNGTCAICRAPVDPNSQQRNNTSTDSANGHNPSNHANPSTSTTNDQGATLRN
ESFNAASQSNLSSEHGHSSRTPMDDFVDEEPLE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccaaccggtcatttggtactgtcattcttgctcgaatgaatttcaaaggcca
gggaattgcccaagatgtaatagtgattttgtagagatggtcgagccgaatacggcaccc
gaagatgacccgagagctgcgaattttgtaaatgcgactgaatttaacgatccaaatgca
atgttacaaaatatccttcagtcactgggccaaggtgttgttcctaatgtaaatcctact
gatgccaaccgaactgcaaatcctaacacaaattcgaatccgaatccgaatgctacaaat
gcccagcctaatcctacaatgttttctacgggacaattttcaactgagcaaggtttaccc
aatgtcttttttggagcggctgcagctcaaccgggcagcggcacgccttttgttatgcct
ggaatcgttaatgcagcccaaattcgaaatttttttcaaaatataatgggtggaaatgct
cctcagcctgaagcaaattctgaacaagcaagaaatgctaacactgaaactagcaatcct
ccatttgcctcggcgcaaactcaaggtcaagaacatcgacctagcagtccaaaccctgcg
gaacatatgactggtgcatatgtaaatacacctttgaatcaacctccttcctatgctgca
tctacccaacccgaatttcaacaaacgacctccccaattttctcttcctcgtccactcca
ccaccaccacctcctcgtccttctcaacccacttctggcgaatctcaaaacacaaaccct
cgttttcctttttctgctcaaagttttgttttttctgtcggtcccaatggtgccttacat
caagttaatacctccactgaaaatcctcaaaatgctcaggccggtgcaatccctatcact
gatctgggctctattctcgaaagaatttttggctcgctcaaccaacctggcgctcaacaa
ggtgaaggtgagccgtttaatcctgctaatatgttctccaatatttttaatctttccgga
aatccaggtgactatgcatggggtgctcgtggcctagatgatatcatttcccagttaatg
gaacaagctcaaggacataacgctccagcacctgctccagaggatgtgattgcgaagatg
aaggtgcaaaaacccccaaaagaattgatagatgaggaaggagagtgtactatttgtatg
gagatgtttaagataaatgacgatgttatacagcttccatgtaagcattattttcacgaa
aattgtattaaaccttggctgagagtcaatggcacctgtgcaatttgcagggctcctgtt
gatccaaacagtcagcaacgaaataacacttcgactgactcagccaatgggcacaatccc
tctaatcatgccaatcctagtactagcactactaacgatcaaggtgctacattaagaaat
gaatcttttaatgccgcatctcagtctaacttgtcgagcgaacatgggcattcaagtcga
acgcctatggatgatttcgttgatgaggagcctttggagtag
DBGET
integrated database retrieval system
