Schizosaccharomyces pombe (fission yeast): 2542078
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Entry
2542078 CDS
T00076
Symbol
chc1, SPOM_SPAC26A3.05
Name
(RefSeq) clathrin heavy chain Chc1
KO
K04646
clathrin heavy chain
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04142
Lysosome
spo04144
Endocytosis
spo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
2542078 (chc1)
04142 Lysosome
2542078 (chc1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
2542078 (chc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2542078 (chc1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spo04147
]
2542078 (chc1)
Membrane trafficking [BR:
spo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
2542078 (chc1)
Exosome [BR:
spo04147
]
Exosomal proteins
Proteins found in most exosomes
2542078 (chc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
TPR_Vps41
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
Beta-prop_EDC4L
Vps39_1
Motif
Other DBs
NCBI-GeneID:
2542078
NCBI-ProteinID:
NP_594148
PomBase:
SPAC26A3.05
SPAC26A3.05.1
UniProt:
Q10161
LinkDB
All DBs
Position
I:join(3339136..3339177,3339218..3339291,3339348..3344232)
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AA seq
1666 aa
AA seq
DB search
MAQQLPIRFSEVLQLASVGIQPSSFGFANVTLESDKYVCVRDNPNGVNQVVIVDLEDPSN
VLRRPISADSVILHPKKKIIALKAQRQLQVFDLEAKAKINSYVMNQDVVYWTWISDSVIG
MVTDTSVFHWTVSGSDPVKMFDRHSSLNGTQIISYKSNYNEEWFTLIGISSRDNRIAGNL
QLYSKKRKVSQPLESHASAFAVIQPEGVDHEVQVLALASRLPTGSKLSIVEVDRNPNNPA
FATKTVDLFFPPEAVNDFPIAIEIGSTYNVAYVVTKYGFIHVYDLETAKCIYMNRVSGES
IFVTTAHKSVNGLMAINRKGQVLSVSINPETIIPYILSNLNDPGLAVRMASHANLPGADN
LYMQQFQQLMAQGNYSEAAKVAASSPRGILRTSQVIDQFKLIQAAPGQIAPILQYFGTLL
DKGPLNEHETIELARPVLAQNRIQLLEKWYGENKLACTEALGDLVKPYNTPFALKIYETA
NVPNKVVMCLSELGDFGKLATYTSQQNITPDYVSLLQNLVRVNPDQAAEFATQMFNSNPS
INLEKIVDIFMSQNLVQQATAFLLDALKDDNPEHSHLQTRLLEINLINAPQVADAILGNQ
MFTHFDRAVIASLCERAGLVQRALELYDKPADIKRVIVHSNLLNPEWLMNYFSRFSPDEV
YDYLREMLRSNLRQNLQIVVQIATRYSDLVGAQRIIEMFEKFKTFEGLYYYLGSIVNITE
DPEVVYKYIQAACLMNQFTEVERICRDNNVYNPEKVKNLLKEAKLADQLPLILVCDRYDF
VNDLVFYLFRNNMFQFIEIYVQRINPSKTPQVVGALLDIDCDEELVQNLLMSVVGQVPVD
ELVEEVERRNRLKLLLPYLESLLQSGSQDRAIYDALAKIYIDSNNNPEVFLKENNFYDTL
TVGKYCEKRDPYLAFIAYEKGGNDTEIINLCNENSMFKQLARYLLKRSDSNLWSEVLQDS
AYRRPLLDQVIATAVPESSDPEAVSIVVKALMEVDLPSQLIELLEKIVLQPSSFSENANL
QNLLFLTAIKADKSRVMEYIDKLDKYDVDEIAEIAIENGLYEEAFRIYKIHNKHEQAMKV
LVEDIVSLDRAQDYAETVEQPEVWSRLAKAQLDGIRIPDAIESYLKADDPSNYSEVIELA
SRAGKYEELIKYLLMARSKMHEPDVDSALLIAYAKTNQLTEMETFLIGSNVADVKAVGDE
CFESKNYEAAKLMYSSISNWSMLATTLVYLGEYQGAVDCARKANSIKVWKQVGTACIDKR
EFRLAQICGLNLIVHAEELPGLIRLYEERGYFEEVISLMEAGLGLERAHMAFYTELAILY
AKYKPERMMEHLKLFWGRLNMAKVIRACDQMHLWNEAVFLYVHDQSYDNAAAVMMEQPEA
FDHQSFKDIIVHVANLELYYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENT
PLILNFMVAIQHLNIQAVNHAYNDLLIEMEDYQSLQDSIENYDHFDAIALARRLEKHSLL
EFRRIAAYIYRKNKRWTQSIELSKQDRFYKDAIITARDSDQTTIAEDLMKYFVEIGNYEC
FAAILYTCYHLLRNDLVMEISWRKGLQDYAYPYFINFQCEMFSKVLNLEKDLKDRQAVKS
EEESASTIGAGILGNTLMLTQGPMANNNDQFDSFQQASPMPRLGNF
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacaattaccaatacggttcagtgaggtgttacagctcgcatccgtaggaatt
caaccgtcttctttcggatttgcaaatgtaacccttgaatctgacaaatatgtttgtgtt
cgcgataatccaaatggtgtaaaccaggtcgttattgtcgatttggaagatccatctaat
gtgttgcgacgtcctatttcggcagattcagttatcttacatcccaaaaagaaaattatt
gcattaaaagcacaaagacaacttcaagtattcgacttggaagcgaaagcgaaaattaat
agttatgtaatgaatcaagatgtcgtttactggacttggatcagcgatagcgttatcggt
atggtcactgacacttctgtgttccactggaccgtctccggctctgatcctgttaaaatg
tttgatcgtcatagctcattgaatggaacgcagatcatttcctacaagagcaactataat
gaagaatggtttacattgatcggtatttcctcccgggataaccgtattgctggcaatctt
caactgtattccaaaaagaggaaggtcagtcagcctctggaaagtcacgcttctgcattt
gcagtcattcaaccagaaggcgttgatcatgaagttcaagttttagcacttgccagtcga
ttacccacaggctcgaaacttagtattgttgaggtagaccgtaaccccaacaatcccgcg
tttgctaccaaaaccgtcgatcttttcttccctccggaagccgttaatgattttcctatt
gctattgaaattggttccacttataacgttgcttatgttgttaccaaatatggctttatt
catgtttatgatttggaaaccgcgaaatgcatttatatgaatcgtgtttcgggtgaatca
atctttgtaaccactgctcataaatctgtgaatggtcttatggccattaaccgaaagggt
caagttcttagcgtatccataaaccctgaaaccatcattccttatatcttgtctaatctt
aatgaccctggtttggcagtccgaatggcatctcatgctaatcttcccggagctgacaat
ttgtatatgcaacagttccagcagcttatggctcaaggaaactacagcgaggctgctaag
gtggctgcttcatctcctcgtggtattcttcgtacctctcaggtgattgatcaattcaag
cttattcaagctgctcctggtcaaattgctcctatcttacaatatttcggcactttgttg
gataagggtcctttgaatgaacatgaaacaattgaattggctcgtcctgtgcttgctcaa
aaccgtatccaacttcttgaaaaatggtatggtgaaaacaagttggcctgtacagaagcg
ttgggtgatttagttaaaccttacaacactcctttcgcattgaagatttacgaaactgcc
aatgtgccaaacaaggttgtcatgtgcttatcagagttgggagattttggcaagttggct
acttacacatctcagcaaaacatcactccggattacgtctctcttctccaaaaccttgtt
agagttaaccctgatcaagctgcggagtttgctactcaaatgttcaacagtaacccctcc
attaatttagagaagattgttgacattttcatgtctcagaatttagttcaacaagcgacc
gcatttttgttggatgctcttaaggatgacaatcctgaacattctcatcttcaaactcgt
cttcttgagattaatttaattaatgcccctcaagttgctgatgctattttgggtaaccaa
atgtttactcactttgatcgtgccgtaattgcttcgctttgcgagcgcgctggtttagta
caacgtgctttggagttgtatgataagcctgctgatattaagagagtgattgttcactca
aatttattgaatcctgaatggttgatgaattactttagcagattttcacctgacgaggtt
tatgattaccttcgtgaaatgcttcgctctaatcttcgtcaaaatcttcaaatagttgtc
caaattgctactcgttactcagaccttgttggtgctcaacgcatcattgagatgtttgaa
aagttcaagacttttgaaggattgtactattatttgggtagtattgtaaacatcactgaa
gatccagaagtcgtatataagtatatccaggctgcttgtttgatgaaccagtttactgaa
gttgaacgcatctgtcgtgacaacaatgtttacaaccctgagaaggttaagaacttgctc
aaagaagccaaattagcggatcagcttccccttattcttgtttgcgatcgttatgacttt
gtcaatgatttggttttctatcttttccgaaacaacatgtttcaatttattgaaatatac
gttcaacgtattaatccctctaagactcctcaagtggtaggtgctttgttagatattgat
tgcgatgaagaacttgtccaaaacctcttgatgtctgttgttgggcaggttcctgtggat
gagttggttgaagaagttgagagacgcaatcgccttaaacttttgctgccctatttggaa
tctcttttgcaatctggtagtcaagatcgtgctatttatgacgcacttgccaagatatat
attgattccaataacaatcctgaagtatttttgaaagaaaacaacttttatgatactctt
acggttggtaaatactgtgaaaagcgtgatccctatttggctttcatcgcttatgagaag
ggtggtaatgatactgaaatcattaacctatgtaacgaaaactcaatgttcaaacagtta
gctcgttatcttcttaagcgcagtgactctaacctttggtccgaggttttgcaagacagt
gcttaccgccgtcctttgttggaccaggttatcgcaactgcagttcccgaatcttcagat
cctgaagcagtttcaattgtagtgaaagctttaatggaagtagatcttccttcacagctc
attgaattattggagaagattgttttgcaaccttcatccttcagcgaaaatgccaatctt
caaaacttgttgtttttgactgccattaaagctgataaatcacgtgttatggagtatatc
gataagttggataagtacgatgtcgatgagattgccgaaattgctattgaaaatggcctt
tatgaagaggctttcagaatttacaagattcacaacaagcatgaacaggctatgaaggta
ttagttgaggacattgttagtctcgatcgtgctcaagactatgccgaaacagttgaacag
cctgaagtttggtctcgccttgctaaggcccaattggatggaattagaattccggatgct
attgaatcatatttgaaggcagatgatccttcgaattactcagaggtaattgaattagct
tctcgtgctggtaagtatgaggaattgatcaaatatcttttgatggcaagaagcaagatg
catgagcctgatgtcgatagcgctcttcttattgcctatgcaaagaccaaccaattgact
gaaatggaaaccttcttgatcggctctaacgttgctgatgtcaaggcagtcggtgatgaa
tgctttgaaagcaaaaactatgaggcagcaaagcttatgtattccagcatttccaattgg
tctatgcttgccactactttagtctatcttggagaatatcagggagctgttgattgtgct
cgtaaggccaattccattaaggtttggaaacaagttggtaccgcttgtatagacaagcgt
gagtttagacttgctcaaatttgtggtttgaatcttatcgtccatgctgaggaacttcct
ggcctcatccgactttacgaagagcgtggttatttcgaagaggttatctcgttaatggaa
gctggtttgggtttggagcgtgctcatatggctttctacaccgaactcgctattttatat
gctaaatacaagcccgagcgtatgatggagcatttgaaactgttctggggtagactcaat
atggccaaagttattagagcttgtgatcaaatgcatttgtggaatgaagctgttttctta
tatgttcatgaccaaagttacgataatgccgcagctgtgatgatggagcaacccgaggcg
tttgatcatcaatccttcaaggacattattgttcatgttgctaatctcgagctttattat
cgtgcacttaacttctatctggagcaacatcccatgcttctaactgatttgttagctgcc
cttactcctcgcatcgatcatcctcgtgtaattcgtatttttgagaaatccgaaaataca
ccacttattttgaactttatggttgccattcaacatcttaatattcaagctgttaaccat
gcctataatgacttacttattgagatggaagattaccaatccttgcaagattctattgag
aattatgatcattttgatgcgattgctttggccagacgtcttgagaagcattctttattg
gagtttagacgtatcgccgcttacatttatagaaagaacaaacgttggacacaatcaatt
gaactttccaagcaagaccgtttttacaaggatgccattattactgcccgcgattccgat
cagactaccattgccgaggatttaatgaagtactttgtggaaattggcaactatgagtgt
ttcgctgctattctatatacttgctatcacttgttgcgcaacgatttagtaatggaaatt
agctggcgtaagggcttacaagattacgcttacccctactttattaatttccaatgtgaa
atgttttcaaaagttctcaatttagaaaaggacttgaaggatcgacaagccgttaagtcg
gaagaggaatcagctagtacaattggtgccggaatacttggcaatacgttaatgcttacc
caaggacccatggctaacaataatgaccaatttgattctttccaacaagcatccccaatg
ccaagacttggtaatttttag
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integrated database retrieval system
