Schizosaccharomyces pombe (fission yeast): 2542126
Help
Entry
2542126 CDS
T00076
Symbol
not3, SPOM_SPAC1B3.05
Name
(RefSeq) CCR4-Not complex subunit Not3/5
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2542126 (not3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2542126 (not3)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
2542126 (not3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
2542126 (not3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
2542126
NCBI-ProteinID:
NP_594789
PomBase:
SPAC1B3.05
SPAC1B3.05.1
UniProt:
O13870
LinkDB
All DBs
Position
I:join(4934663..4934684,4934731..4934768,4934831..4935025,4935082..4936749)
Genome browser
AA seq
640 aa
AA seq
DB search
MSARKLQVEIEKTFKKVTDGIAIFDEVYEKLSASNSVSQKEKLEGDLKTQIKKLQRLRDQ
IKTWASSNDIKDKKALLENRRLIEAKMEEFKAVEREMKIKAFSKEGLSIASKLDPKEKEK
QDTIQWISNAVEELERQAELIEAEAESLKATFKRGKKDLSKLSHLSELESRIERHKWHQD
KLELIMRRLENSQISPEAVNDIQEDIMYYVECSQSEDFAEDENLYDELNLDEASASYDAE
RSGRSSSSSHSPSPSASSSSSSENLLQDKAEAEEKVSADASVQDIAEKESLDADKELATN
DQEDDEEENQAETQKDGAISNNENMQSEVQTTNPSASTSAVTNITKPTLIQNPSTPLSVS
NSKVASPETPNATHTAPKVEMRYASAAAAAAAALAKESPSHHYIMQQVRPETPNSPRLNS
TVIQSKWDSLGHTASPKMQTQPVRSVSQSSATTETNVKPTKEENADVPVSSPDYLKDLVN
ALNTSKEQHKGAIDKEKLTEALNISCVYVPDATDAAKPQYYIPKDPYPVPHYYPQQPLPL
FDSSEMTELVDPDTLFYMFYYRPGTYQQYIAGQELKKQSWRFHKKYTTWFQRHEEPKMIT
DEFESGSYRYFDFEGDWVQRKKADFRFTYQYLEDDDDWTR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcgaaagttgcaagtggaaattgagaagacctttaaaaaagtgactgatggg
attgcgatttttgacgaggtttacgaaaagctaagcgccagtaatagcgtctctcaaaaa
gagaaactagagggtgatttgaagactcaaattaaaaaactacaacgtcttcgtgaccag
attaagacttgggctagcagcaatgatatcaaagataaaaaggccttgttagagaacagg
cggcttattgaagctaaaatggaggaatttaaagctgttgagcgagagatgaagataaaa
gctttcagtaaagagggccttagcatcgcttccaagttggatcctaaggaaaaagaaaag
caagatactattcagtggatttccaatgctgtagaagaactagaacggcaagcagaattg
atcgaagcagaggcggaaagtttaaaagctacatttaaaagaggtaaaaaagatttatct
aaactttcgcacttgtcagaattggaatctcgaattgagcgacacaaatggcatcaagac
aaactcgaacttatcatgaggagactggaaaactcccaaatttctccagaggccgtgaat
gatattcaagaagatataatgtattatgtagagtgtagtcaatcagaagattttgctgaa
gacgaaaacctctatgacgagcttaatctagatgaagcctccgcctcttatgatgcagag
aggtccggtcgttcctcatcttcttctcattccccttctccttctgcatcctcttccagt
tcttcggaaaatttgcttcaggataaagcagaagctgaagaaaaagtttctgcagatgct
tccgtacaagacattgcagaaaaagaaagtcttgatgctgataaagagttggcgactaat
gaccaagaagatgatgaagaggagaatcaggctgaaacccaaaaggatggtgctatttcc
aataatgaaaacatgcaatctgaagttcaaacaaccaacccttcggcttctacctctgca
gtcaccaatattacaaaaccaacgcttattcagaacccttctactccgctaagtgtctcc
aattcgaaagttgcttctcccgagactccaaatgcaacgcatactgctcccaaagttgag
atgagatatgcttctgctgcagcggcagcggctgcagcgctggcgaaggaatctcccagt
caccattatattatgcaacaagttcggcctgaaaccccaaactctcctcgtttaaattct
acagtaattcaatctaaatgggatagtttgggccacacagcctctccaaaaatgcaaacg
caacccgttcgatctgtctctcaaagtagcgcaactacagaaacaaatgttaagcctacg
aaagaggaaaatgctgatgtgccagtatcatcgccagactatctcaaggatttagttaac
gccctaaatacttccaaggagcagcacaaaggagcgattgacaaagaaaagctaaccgag
gcccttaacattagttgcgtgtacgttccggatgctacagatgctgccaaaccgcaatat
tatattcctaaagatccttatcctgttcctcattattacccgcagcaaccactcccttta
tttgactcttctgaaatgactgagcttgttgatcctgatactttgttttatatgttttat
tatcgacctgggacttatcaacagtatattgctggtcaggaattgaaaaagcaaagctgg
agatttcacaaaaaatacaccacgtggttccagcgccatgaagagccaaagatgatcaca
gatgaatttgaaagtggtagttatcgatactttgattttgagggagattgggtgcagaga
aaaaaagcagatttccggtttacatatcagtacctagaagacgatgacgactggacacga
taa
DBGET
integrated database retrieval system
