Schizosaccharomyces pombe (fission yeast): 2542136
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Entry
2542136 CDS
T00076
Symbol
vps8, SPOM_SPAC17A2.06C
Name
(RefSeq) WD repeat-containing protein Vps8
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04138
Autophagy - yeast
spo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
2542136 (vps8)
04148 Efferocytosis
2542136 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2542136 (vps8)
Membrane trafficking [BR:
spo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
2542136 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Vps8_C_schizo
Beta-prop_VPS8
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
2542136
NCBI-ProteinID:
NP_594240
PomBase:
SPAC17A2.06c
SPAC17A2.06c.1
UniProt:
O13756
LinkDB
All DBs
Position
I:complement(3563011..3566829)
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AA seq
1272 aa
AA seq
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MQSKYGRSSLKIKNGDDTRTLRALSFSKDSVNSSSFDNEAASTTLGISTAIHASNRPFRQ
DEYSWNDCWMRWGQLRRVSSQLRELRFTMNDQPATVTSIAYQGTLLVAGTSSGHVLLNDW
RTNDFQILKPGLSSNESVTLPVTSLAISNSKRIVCQGHAGGIIFVWDVSRKPPLQLFTIN
QHSEDSVLTHLVFNGNSDDVLLSTDHLGKIAVHEFYNLVINKHCTSWNLDMSKSNSLNLD
SIIVDTSSISFEELHITGVKHFSFVVLQSLQSIQIVTLFPKTTLIYEFKYPAGIVSSACH
SFSSSIVHKNGENTKLHAFFATAYNNNLRLYSVTFHKGYMSLQLMDRKKFAKAIWKLWWF
PSSSIIIILFDDMELAFVNSMSLDIIGTSTILDKSLLRWDWYSNSLAAIGVSQTVFPFIS
SSLCISPRYMFVVNSETVSVGSFLMVSEQLQMLSERYGFFDSIKFGSYCVSNLSIFPKLL
LEKTSVINLIMALYVKLLKSLARDFPARSPFEATSQKTNDYELEVQHLFTWTCELYSENF
NTVISSFIIANSLGILPEIIEQIIPVFTRVGKVYVVLEALFDLILSQRFTNPSPQLQHHI
LNYLNDCKRLQDMDKLIPCIEYQSLDLDFITKFSRSKGLFDSLCYVSIYAFNDYSIPLVQ
FLNLLKSDIDSPSEETSINVEKGFHFLLYSLTGMKYPLGHSNNINDAYVVIHTLLKVIFS
VVPLPFDVPVDNSVDFPYLRLFLEKHADDFFRCLEVAFDYPYFSLEKVTIAKKLLDTVNR
QWILECISQLYEKKKSVSQSYYIFVSHVTANYSNQLLFSQSFYQGILDGLCNIDVPDDKR
EVVEAAIEELLTVYEHFDIATTLLSCWDHQLYQVILHISFKCGRYEDYIEAILALWKQKG
QKHSFVSESSEALISLVFNNLQTINRFPGHRERYVSTLISHCGDLFAINHVCFVRNSLKY
LLDDFTKVITKTFSIKSIRLQFLSLIIYEITYEQLSSWYRERTILSFLELVSFDQGDVKM
LELLRLHPKLVRLQGLMEILNKNDCIESCIFVYRELAEYKLALSHVSKYIEKSMSVFDLE
KSDDMTSRRIERLCLHLKTVVPLFEQCTKEVSAEDVTNFWLELVFTLLLVYIKLSLKGSI
NSQITFKDFQQELSLCIENLLDSFLSKTNSYKIALNTVLVRICEEASRNEHSDQYLRKLL
LKLITDLYINHDITKECFLLWDMKQFYEIRSTLLQNASGVLVEDPKLQKNAKGQYTSKLK
VYFSGLIEREDL
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccaagtatggtagatcttccttaaaaataaaaaatggtgatgatactcggaca
ctaagagctctttccttttccaaggactccgttaatagctcgtcttttgacaatgaagcc
gcaagcaccacccttggaatttcaactgctatccatgcttccaatcgtccttttaggcaa
gatgaatattcatggaatgattgttggatgcgctggggacagttacgcagggtttcttcc
caattgagagaactcagatttaccatgaatgatcagcctgcaactgtcacgtctatcgct
tatcaaggtacgttgttagtagctggaacatcctctggacacgtattgttgaatgattgg
cgaacgaatgactttcaaatcctcaagcctggtttatcttctaatgaatccgttactcta
cctgtcacttctttagcgatttcgaattctaaaagaattgtatgccaaggacatgctggt
ggcattatttttgtttgggatgttagccgaaagcctcccctacagttgtttacaattaat
caacattcggaagattctgtgttgacacacctcgtatttaatggtaattctgatgatgtt
ttactttctaccgatcatctcggtaaaattgctgttcacgagttttacaatttggttatt
aataaacattgcacttcctggaatctagatatgtcaaaatcaaatagcttaaatttagac
tctattattgtcgatacttccagcatatcttttgaagaacttcacattacaggtgtgaag
catttttctttcgttgtactccaatctttacaatcgattcaaattgtgactctttttcct
aaaactactcttatttatgaattcaaatatcccgccggaattgtttcttctgcttgtcac
tcattttcctcaagtatagttcataaaaacggtgagaataccaagctgcatgcatttttt
gctacagcatataacaacaaccttaggttgtattcggttacttttcacaagggatacatg
tcattacaacttatggatagaaaaaaatttgccaaagcaatttggaagctctggtggttt
ccttctagtagcattataataattttattcgatgatatggagttagcttttgttaatagc
atgtctttggacatcattggcacttctaccatattggataaatctcttttaaggtgggat
tggtattcaaactcattagctgcaattggtgtttcacaaaccgtttttcccttcatctcc
tctagtttatgcatttcacctcgatatatgtttgttgtcaattctgaaaccgtctcagtt
ggatcatttttaatggtttctgagcaattacaaatgctttcagaacgttatggatttttt
gattcaattaaatttgggagttattgtgtttcaaatttaagtattttccccaaattactg
ttggagaaaacttctgtgattaatttgattatggctctgtatgttaaattgctgaagtca
ttggcccgtgatttccctgctagatctccatttgaagctactagccagaaaacgaatgat
tatgagctagaggttcagcatctcttcacatggacttgtgaactttactcagagaatttt
aatactgtaatatcaagttttataatagctaattctttgggcattttaccagaaataatt
gagcaaattattcctgtgtttaccagggtcggcaaagtatatgttgtattggaagcttta
tttgatttaattcttagtcagagatttaccaatccttctccgcaattacagcatcatatc
cttaattatttaaacgattgcaagcggctacaagatatggataaacttattccttgcatt
gaataccaatcccttgatttagattttatcacaaagttctctcgttccaaagggttgttt
gattctctttgttacgtatcaatttatgcttttaacgattattcgatacctttggtacaa
tttttaaaccttttgaaatccgacatcgattcgccttctgaagagacttcaataaacgtg
gaaaaaggatttcattttcttttatattcattgactggtatgaaatatccgcttggacat
tccaacaatatcaatgatgcttatgtagttatacatactctcctaaaagttatattttcg
gtagtaccattaccttttgatgttccggtagataactcggtggattttccctatctacgc
ttgtttttggaaaagcatgccgatgatttctttcggtgtttagaagtggcatttgactat
ccttatttctctctagaaaaagttacaattgctaaaaaattgctggatactgtaaatcga
caatggatactagaatgtatatctcagttatatgagaagaaaaaatccgtttcgcagagc
tattatattttcgtatctcatgtcaccgcgaactattcgaatcaactgttattctcacag
tctttttatcaaggcattttggatgggctttgtaatattgatgttccagacgacaaaagg
gaagtagtagaagctgcgattgaagaattgttgactgtctacgaacattttgatattgct
accacattgctttcttgttgggatcatcagttataccaagtaatccttcatatttctttc
aaatgtggtagatatgaagattatatagaagcgatattggcattgtggaagcaaaaaggt
caaaaacattcttttgtatctgaatcttctgaggcattgattagtttagtatttaacaat
ttgcaaactatcaatcgcttccctggtcatcgagagagatacgtatcaactttgattagt
cattgcggggatttatttgcaatcaaccatgtttgttttgttcgaaattcattaaagtat
cttcttgatgattttaccaaagtgattaccaagacattctcaattaaatcaatccgatta
caatttttgagcctaatcatctacgaaatcacttacgaacaactttcaagttggtaccga
gagagaactatactttcttttctagaacttgtctcatttgatcaaggcgacgtaaagatg
cttgaacttcttcgtcttcacccaaaacttgtaaggttacaagggcttatggaaattttg
aataaaaatgactgtattgaatcttgcatatttgtatatcgtgagcttgctgaatacaaa
ttagctttatctcatgtctccaagtacattgagaaatcaatgtctgttttcgacctcgaa
aaaagcgacgatatgacaagtcgaaggattgagcgtctatgtttacacctaaaaacagtg
gttcctttgtttgagcagtgcacgaaagaagtttcagcggaagatgtcactaatttttgg
ttagaattggtgtttactcttcttcttgtatacatcaaattaagcctcaaaggttcgata
aatagtcaaattacgtttaaagattttcagcaagagctttccctttgcattgaaaatttg
ttggatagtttccttagcaaaaccaattcttataaaatcgcattgaatacggtattggtc
agaatttgtgaagaggcatcaaggaacgagcattctgatcaatatttaagaaaactgtta
ttaaaactgatcactgacttatatatcaatcacgatattactaaagaatgctttctttta
tgggatatgaaacagttttatgaaatccgcagcacattactacaaaacgccagcggtgta
ttagttgaggatccaaaattgcaaaaaaatgcgaaaggacaatacacttctaagcttaaa
gtatatttttccggacttattgaacgagaagacttataa
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