Schizosaccharomyces pombe (fission yeast): 2542138
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Entry
2542138 CDS
T00076
Symbol
ubi5, SPOM_SPAC589.10C
Name
(RefSeq) ubiquitin-40S ribosomal protein S31 fusion protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03010
Ribosome
spo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
2542138 (ubi5)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
2542138 (ubi5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
spo03011
]
2542138 (ubi5)
04121 Ubiquitin system [BR:
spo04121
]
2542138 (ubi5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spo04147
]
2542138 (ubi5)
Ribosome [BR:
spo03011
]
Ribosomal proteins
Eukaryotes
Small subunit
2542138 (ubi5)
Archaea
2542138 (ubi5)
Ubiquitin system [BR:
spo04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
2542138 (ubi5)
Exosome [BR:
spo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
2542138 (ubi5)
Exosomal proteins of colorectal cancer cells
2542138 (ubi5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Plexin_RBD
Dsc3_N
DUF2604
TBK1_ULD
Zn_Ribbon_TF
Ubiquitin_5
UBL_UBAC1
DZR
OTU1_UBXL
FtrD-like
Fer2_3
Zn_ribbon_NrdR
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
2542138
NCBI-ProteinID:
NP_594058
PomBase:
SPAC589.10c
SPAC589.10c.1
UniProt:
P0C8R3
LinkDB
All DBs
Position
I:complement(3108428..3108880)
Genome browser
AA seq
150 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGGKKRKKKTYTTPKKIKHKHKKVELAVLKYYKVEDDGSVKRLRRE
CPNCGASTFMANHKDRLYCGRCHLTLKLEA
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattttcgtcaaaacccttacgggtaagacgattacccttgaggtggagtcctct
gacactattgataatgtcaagagcaaaatccaagacaaagaaggaattcctcctgatcaa
caacgtcttattttcgctggtaagcagttagaagatggacgtactttgtctgattacaac
atccaaaaggagtccactcttcacctcgttttgcgtcttcgtggtggtggtaagaagcgt
aaaaagaagacttacactactcccaagaagatcaagcacaagcacaagaaggttgagctc
gccgtcctcaagtactacaaggttgaggatgatggaagcgttaagcgtcttcgtcgtgag
tgtcctaactgtggtgcatccaccttcatggccaaccacaaggaccgcctttactgtggt
agatgccacttgaccctcaaattggaagcttaa
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