Schizosaccharomyces pombe (fission yeast): 2542203
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Entry
2542203 CDS
T00076
Symbol
rad15, SPOM_SPAC1D4.12
Name
(RefSeq) transcription factor TFIIH complex subunit Rad15
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03022
Basal transcription factors
spo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
2542203 (rad15)
09124 Replication and repair
03420 Nucleotide excision repair
2542203 (rad15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2542203 (rad15)
03036 Chromosome and associated proteins [BR:
spo03036
]
2542203 (rad15)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2542203 (rad15)
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
2542203 (rad15)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
2542203 (rad15)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
2542203 (rad15)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
2542203 (rad15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
AAA_11
YtxC
BAR_3_WASP_bdg
Motif
Other DBs
NCBI-GeneID:
2542203
NCBI-ProteinID:
NP_593025
UniProt:
P26659
LinkDB
All DBs
Position
I:664782..667100
Genome browser
AA seq
772 aa
AA seq
DB search
MKFYIDDLPILFPYPRIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQ
QHYPEHRKLIYCSRTMSEIDKALAELKRLMAYRTSQLGYEEPFLGLGLTSRKNLCLHPSV
RREKNGNVVDARCRSLTAGFVREQRLAGMDVPTCEFHDNLEDLEPHSLISNGVWTLDDIT
EYGEKTTRCPYFTVRRMLPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDN
VCIESLSIDLTESSLRKASKSILSLEQKVNEVKQSDSKKLQDEYQKLVRGLQDANAANDE
DQFMANPVLPEDVLKEAVPGNIRRAEHFIAFLKRFVEYLKTRMKVLHVIAETPTSFLQHV
KDITFIDKKPLRFCAERLTSLVRALQISLVEDFHSLQQVVAFATLVATYERGFILILEPF
ETENATVPNPILRFSCLDASIAIKPVFERFRSVIITSGTLSPLDMYPKMLQFNTVMQESY
GMSLARNCFLPMVVTRGSDQVAISSKFEARNDPSVVRNYGNILVEFSKITPDGLVAFFPS
YLYLESIVSSWQSMGILDEVWKYKLILVETPDPHETTLALETYRAACSNGRGAVLLSVAR
GKVSEGVDFDHHYGRAVIMFGIPYQYTESRVLKARLEFLRDTYQIREADFLTFDAMRHAA
QCLGRVLRGKDDHGIMVLADKRYGRSDKRTKLPKWIQQYITEGATNLSTDMSLALAKKFL
RTMAQPFTASDQEGISWWSLDDLLIHQKKALKSAAIEQSKHEDEMDIDVVET
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctatattgacgatctacctattctgtttccttatccacgcatctatcccgag
cagtatcagtatatgtgtgatttgaaacattctttggatgcgggaggcattgcgctctta
gaaatgccttcgggtactggaaagaccatttctcttttgtcccttattgtttcatatcaa
caacattatcctgagcatcgcaagctcatctattgttcacgtaccatgtcggaaattgat
aaagcattagctgaattgaagcgtttaatggcgtatcggacttcacagttaggatatgaa
gaaccatttttgggtctcggactaaccagtcgcaaaaatttatgtttacacccttctgtt
cgtcgtgaaaaaaatgggaatgtggtagatgcccgttgtcgctcacttacggcgggtttt
gtgcgggagcaaagattggctggtatggatgttcctacttgtgagttccacgacaatttg
gaagatcttgagccacacagccttatatctaacggtgtttggacccttgatgatatcaca
gaatacggcgaaaaaactacacgatgcccctattttactgtacgtcgtatgctaccgttt
tgtaatgttattatttattcgtatcattatttactagaccccaaaattgctgaacgagtt
tctcgagaactcagtaaagattgcattgttgtttttgatgaagcacacaatattgacaat
gtgtgtattgagtctttaagtattgatttgacagaatcttctttgagaaaagcttcgaag
agcattttgtctcttgagcaaaaagtcaacgaagtaaaacagtctgactcaaaaaaactt
caggatgaataccaaaagcttgttcggggccttcaagatgctaatgccgcaaatgacgaa
gaccagtttatggcgaatcccgttttgcctgaggatgttttaaaggaagctgttcctgga
aatattcgacgagccgaacattttattgcatttttgaagcgttttgtagaatatttaaaa
acaaggatgaaagttttgcacgttattgctgaaacaccaacttcttttttgcaacatgtt
aaagacattacatttatagacaaaaagccgcttcggttttgcgctgagcgactcactagt
cttgttcgtgccttacaaatttcactagttgaagattttcattctttgcagcaagtagta
gcttttgcgacccttgttgctacttatgagcgtggatttatcctaattttggaacccttt
gaaacagaaaatgctacagttcccaatccaatattgcggttttcctgtcttgacgcctca
atagctattaaaccagttttcgaaagatttaggtctgtgattatcacgagtggtacttta
tcccccctcgatatgtaccccaagatgttgcagtttaatactgttatgcaggaatcgtat
ggaatgtcacttgcacgaaactgtttccttcctatggtagttactcggggtagcgatcaa
gtagctatttcttcaaaatttgaagcccgtaatgatcctagtgttgttcgcaattacggt
aatatactggttgagttttcgaaaattacacctgatggcttagtcgcattttttccaagt
tatctctaccttgaaagtattgtttctagttggcaaagtatgggtattctagatgaagtc
tggaagtataagttgattttggtggaaacaccagatcctcatgaaacaactctcgcctta
gagacttaccgggctgcttgcagcaatggccgtggagcagtattgctgtcagtcgctaga
ggaaaagtctcagaaggagtggattttgatcatcattatggtagagcagtaatcatgttt
ggtattccgtatcagtatactgagagtcgtgttttaaaagcacggttagaatttctgagg
gatacgtatcaaattcgggaagcagatttcttaacatttgatgccatgcggcatgctgcc
caatgtttaggtcgcgttttgcgtggaaaagatgatcatggaattatggtgttagcagat
aaacgatatggtcggtctgataagcgtacaaaattacctaaatggattcaacagtatata
accgaaggcgctacaaatttaagcactgatatgtccctcgctttggcgaaaaaattttta
cgaactatggcacagcctttcactgcgtctgatcaggaagggatttcttggtggagtctt
gatgatttgttgattcatcagaagaaagcattgaagtctgcggctatagaacaatccaaa
catgaggatgagatggatattgatgtggttgaaacttaa
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