Schizosaccharomyces pombe (fission yeast): 2542242
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Entry
2542242 CDS
T00076
Symbol
shm2, SPOM_SPAC18G6.04C
Name
(RefSeq) serine hydroxymethyltransferase Shm2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo00260
Glycine, serine and threonine metabolism
spo00460
Cyanoamino acid metabolism
spo00630
Glyoxylate and dicarboxylate metabolism
spo00670
One carbon pool by folate
spo00680
Methane metabolism
spo01100
Metabolic pathways
spo01110
Biosynthesis of secondary metabolites
spo01200
Carbon metabolism
spo01230
Biosynthesis of amino acids
spo01240
Biosynthesis of cofactors
spo04981
Folate transport and metabolism
Module
spo_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
2542242 (shm2)
09102 Energy metabolism
00680 Methane metabolism
2542242 (shm2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
2542242 (shm2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
2542242 (shm2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
2542242 (shm2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
2542242 (shm2)
Enzymes [BR:
spo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
2542242 (shm2)
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GFIT
Motif
Pfam:
SHMT
MEDS
DACNH
Motif
Other DBs
NCBI-GeneID:
2542242
NCBI-ProteinID:
NP_593668
PomBase:
SPAC18G6.04c
SPAC18G6.04c.1
UniProt:
Q10104
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All DBs
Position
I:complement(join(2217187..2218569,2218716..2218799))
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AA seq
488 aa
AA seq
DB search
MAVLRQFVKNSYSSIPKRFYALSANQKKLLKAPLAECDPTVYKILESEKSRQKESIALIA
SENFTSRAVMDALGSIMQNKYSEGYPGARYYGGNEFIDQAERLCQTRALEAFHLDGEKWG
VNVQPHSGSPANLQAYQAVMKPHDRLMGLDLPHGGHLSHGFSTPQKAISAVSTYFSTMPY
NVNKETGIIDYDSLEKAAIQFRPKVIVAGASAYARLVDYKRMRKITEMCNAYLLCDMAHI
SGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFYRKGTRSHDKRGNPILYELEDKIN
FSVFPGHQGGPHNHTITALAVALGQAKTPEFYQYQKDVLSNAKAMANAFITRGYKLVSGG
TDTHLVLVDLTDKGVDGARVERILELVNISANKNTVPGDKSALIPRGLRLGTPACTTRGF
DEKDFERVVELIDEVVSLTKKINEAALKEGKSKFRDFKAYVGDGSKFSEIAKLKKEVITW
AGKFDFPV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcttcgtcaattcgtcaagaactcttactcttcaattcccaagcgcttttat
gcgctttctgctaatcaaaaaaagttactcaaagcaccattggcagaatgtgatccgaca
gtgtataagattttggaatctgagaaaagccgtcagaaagagtcgatagctttaattgct
agcgaaaactttacttcaagagctgtgatggatgcactcggaagtattatgcaaaacaaa
tatagtgaaggctatcctggtgcaagatattatggtggtaatgaatttatagatcaagct
gaaagactatgtcaaacgagagctttagaagcttttcatttggatggggaaaaatgggga
gtaaatgtacaaccccattctgggtctccggccaacttacaggcttatcaagcagtaatg
aagccacacgatcgcctaatgggtttagatttaccccatggcggtcatttatctcatggt
ttctctactccccagaaagctatttcagctgtctcgacttatttttccaccatgccatat
aacgtaaataaggaaactggtattattgactatgatagtttggaaaaggctgcgatacaa
tttcgtcctaaagttatagttgcaggcgctagtgcttatgcacgactcgttgattacaag
cgtatgcgtaaaattacggaaatgtgcaatgcctatttgctttgtgatatggctcacata
tccggtttagtagctgccggtgtaattccttctccgtttgaatacgccgatattgttact
acgacgactcataagtctttacgtggaccgagaggagctatgatattttatcgaaaaggt
actcgttctcacgataaacgtggtaatccaattttatatgaattagaggataaaatcaat
ttctcagtttttcctggacatcaaggcggcccccataatcatacaattactgcgttagct
gtcgcccttggacaagcaaaaactcctgaattctatcaataccaaaaggacgttctaagt
aacgccaaggcaatggccaatgcatttattactcgtggctataagttagtttcaggtggc
acggatactcacttggttcttgttgatttgaccgacaaaggtgtagatggtgcccgtgtc
gaacgtattttagagcttgtaaatatttctgccaacaagaatactgtgcccggagataag
tctgctttaattccacgtggattacgtctgggaactccagcttgcactactcgcggtttt
gatgagaaggattttgagagagtggtagagctaattgatgaagttgtatctttgaccaag
aaaataaatgaagctgctttgaaggaaggaaaatcgaagtttagagacttcaaagcatat
gtgggtgatggttctaaattctctgaaatcgccaaactgaagaaagaagttataacttgg
gctggaaaatttgatttccccgtttaa
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